DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and grau

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_788422.1 Gene:grau / 45871 FlyBaseID:FBgn0001133 Length:570 Species:Drosophila melanogaster


Alignment Length:678 Identity:194/678 - (28%)
Similarity:291/678 - (42%) Gaps:167/678 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTVCVLCLDS-SNAGYGLQ--SEEGVRLNIRATIHKHFAFSEVLTAGGDAEV-CRECWNCVSSFE 61
            |.:|.|||.. |.|...||  ..:.....:...:.:||.| |||.....::| |..||..||.|.
  Fly     1 MDICRLCLRGVSGAQMCLQIFDVDSGESKVAEVLRQHFWF-EVLPNDEISKVICNVCWTQVSEFH 64

  Fly    62 EFHQRVSCLHRQ----RSSDSKSEPIEFCGQTEEAIINPLYSVELDALAEAFFAPSEVKVEVNEL 122
            :|:  ||....|    .:|..|.:|         .::|..:..|:...|:.....::|..::| :
  Fly    65 QFY--VSIQEAQVIYATTSKFKQDP---------EMVNTSWPEEVLMPADVLAVDNDVGAQIN-V 117

  Fly   123 EPLPKVELLEDPVKTEIRTAPKRLGVPNEGSPHSKRRIKNELPVDSDSDAPLADFLNSDSKRSSV 187
            .||.:::|.:                                        |::            
  Fly   118 NPLDELDLSQ----------------------------------------PMS------------ 130

  Fly   188 GPAKNSEANKGRQLRRSARRGRPPKAKPESAPSPKKELDSEDGEENARDNNDMEFVAPEAVLGTD 252
                                       ||         ||:.|.:..|.:.|||.:       .:
  Fly   131 ---------------------------PE---------DSKVGIKTERQSPDMELL-------FE 152

  Fly   253 DSSSSSSESSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRK---------REKPLV---PPVR 305
            |:::...|...:|.|....|: ...|.....||.|.||.|.::         :||.:|   ||.|
  Fly   153 DANNEQDEDYEDDEDDDTDDL-IVTRSGRKRKRDVAKPAKTKRGTVSVGRKGKEKMVVKRGPPKR 216

  Fly   306 LSREEIERRKLQQDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFH 370
            :.:.|......::||  |:|.::. ...|.||..|.::|..:|.|.:..|..|..||:|||||.:
  Fly   217 IFKMERLPPFCKEDE--ELIKRYI-VMGCELCIFLAEDFDGIREHFKDKHPDERPYIKCCGRKLN 278

  Fly   371 LRKALAEHVLVHKNPDHFMCSQCGRVFQDSRALEVHEQTHTNPEVKAEPKEKRIYQCEKCPKSFT 435
            .|..:.||...|:||::..|..||:||.:|..|..|...|..|:.:.:      :|||.|.|.|:
  Fly   279 KRCLIQEHARRHENPEYIKCKDCGKVFANSSVLRAHWLVHHVPDEECD------FQCEDCGKRFS 337

  Fly   436 TKAAMEYHDVSKHVPKSEFKYSCPECNK--KIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQT 498
            .:..:|.|..| |||.:|.|:.||:|.|  ...||..::.|:...| .:||.||..|||.::.:.
  Fly   338 RRNLLELHKGS-HVPVNERKFICPQCPKHNAFATEYHMQVHISMQH-RKAANICHVCGKKIKDKA 400

  Fly   499 NLKKHHELEHSEK-PR---PKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPGDEHRCHICNKTST 559
            ..:||..|...|. ||   |:||      |.:||:....||||::. |...|....|..|.|:..
  Fly   401 VFEKHVRLHFEESGPRIKCPRPD------CESWLKDEDNLKQHLRR-HNDEGKLFICSECGKSCK 458

  Fly   560 NSRAL---KRHIYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANM 621
            |||||   ||:.:.|.:    :.|..|.|.||:...|:||.:.||||.||.||.||.||.|||||
  Fly   459 NSRALIGHKRYSHSNVI----YTCEQCGKTFKKDISLKEHMAQHTGEPLYKCPFCPRTFNSNANM 519

  Fly   622 YKHRQRLHRAEWEADRK-------KPLP 642
            :.|::::|..||:..||       |.||
  Fly   520 HSHKKKMHPVEWDIWRKTKTGSSQKVLP 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262 25/81 (31%)
C2H2 Zn finger 334..355 CDD:275368 7/20 (35%)
LIM <361..407 CDD:413332 20/45 (44%)
C2H2 Zn finger 365..382 CDD:275368 7/16 (44%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..443 CDD:275368 6/15 (40%)
COG5236 <455..>574 CDD:227561 45/127 (35%)
C2H2 Zn finger 458..476 CDD:275368 7/19 (37%)
C2H2 Zn finger 487..507 CDD:275368 6/19 (32%)
C2H2 Zn finger 521..540 CDD:275368 7/18 (39%)
C2H2 Zn finger 551..572 CDD:275368 10/23 (43%)
C2H2 Zn finger 580..600 CDD:275368 8/19 (42%)
C2H2 Zn finger 608..629 CDD:275368 12/20 (60%)
grauNP_788422.1 zf-AD 3..74 CDD:462262 24/73 (33%)
C2H2 Zn finger 272..290 CDD:275368 8/17 (47%)
COG5048 <296..453 CDD:227381 58/171 (34%)
C2H2 Zn finger 298..318 CDD:275368 8/19 (42%)
C2H2 Zn finger 329..349 CDD:275368 8/20 (40%)
C2H2 Zn finger 359..409 CDD:275368 17/50 (34%)
C2H2 Zn finger 360..378 CDD:275370 5/17 (29%)
zf-C2H2_8 419..502 CDD:464935 34/93 (37%)
C2H2 Zn finger 450..471 CDD:275368 10/20 (50%)
C2H2 Zn finger 478..498 CDD:275368 8/19 (42%)
C2H2 Zn finger 506..524 CDD:275368 12/17 (71%)

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