DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4707 and LOC4576343

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_001237668.2 Gene:LOC4576343 / 4576343 VectorBaseID:AGAMI1_006583 Length:1044 Species:Anopheles gambiae


Alignment Length:688 Identity:190/688 - (27%)
Similarity:285/688 - (41%) Gaps:185/688 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VCVLCLDSSNAGYGLQSEEGVRLNIRATIHKHFAFSEVLTAGGDAEVCRECWNCVSSFEEFHQRV 67
            :|:.|.:|:||......|.|.:|      .|.|.|..:........||.||...||.|..:.||:
Mosquito    65 LCLECCNSTNATPITDGEFGSKL------QKVFKFPILPEDTLPERVCHECVTIVSDFHTYSQRI 123

  Fly    68 SCLHRQRSSDSKSEPIEFCGQTEEAIINPLYSVELDALAEAFFAPSEVKVEVNELEPLPKVELLE 132
                     .|..|.:    ||:              |.|..|.|.||          .|:|.||
Mosquito   124 ---------QSNQEQL----QTQ--------------LKEQKFQPFEV----------VKIETLE 151

  Fly   133 DP--VKTEIRTAPKRLGVPNEGSPHSKRRIKNELPVDSDSDAPLADFLNSDSKRSSVGPAKNSEA 195
            |.  ...|:..|.:|                                |..|:...:|        
Mosquito   152 DDDFYDAEMEEARER--------------------------------LEEDATEQTV-------- 176

  Fly   196 NKGRQLRRSARRGRPPKAKPESAPSPKKELDSEDG-EENARDNNDMEFVAPEAVLGTDDSSSSSS 259
                  ..||.| :|.|..|:  ||..:..|..|. .|.|....|.|.         ||.     
Mosquito   177 ------HVSATR-KPAKRAPK--PSDTEAADVNDALREEAEGEEDEEI---------DDD----- 218

  Fly   260 ESSGEDSDHSLPDIEPEERYAEIPKR-------VVVKPKKYR--KREKPL--VPPVRLSREEIER 313
                ||.:..:|.::|::...::|.|       |...|||..  |.||.:  :.|..|:::..|.
Mosquito   219 ----EDDEDFVPKVDPKDGTLKVPVRRRRRLAQVKAPPKKRTTLKTEKQVEKLEPEELAKQHEED 279

  Fly   314 RKLQQDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFHLRKALAEH 378
            |::|:          |.||.|..|:|.:.:|||::.|.|..|:.: ||:.||.:.|:.|..|.:|
Mosquito   280 RRIQE----------FYKFECEHCSLPMDSFADLQVHYRREHSTK-GYVRCCEKVFYRRFQLLDH 333

  Fly   379 VLVHKNPDHFMCSQCGRVFQDSRALEVH-EQTHTNPEVKAEPKEKRIYQCEKCPKSFTTKAAMEY 442
            :..|:..  ..|..|.:.::.||.|.:| .::|:.       :|.|.::|:||.:||..:..::.
Mosquito   334 IAAHQGT--IKCEVCQKSYKSSRYLALHMMKSHSR-------EEDRPFKCDKCRQSFHKEHLLKA 389

  Fly   443 HDVSKHVPKSEFKYSCPECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHHELE 507
            |. :.|:.:     .||.|.|.:.::..||.|:.:||..::..|||.|||..|::..:::|.. |
Mosquito   390 HQ-ANHLSE-----KCPICEKVVSSKYALKTHVAHMHGSDSNQICDVCGKEFRTKQAMERHIN-E 447

  Fly   508 HS-----EKPRPKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPGDEHRCHICNKTSTNSRALKRH 567
            |.     :|       |||.:|..|......|::|::.:|...|...||.:|...|.|||||..|
Mosquito   448 HMGVDVVQK-------VQCNVCQRWFHGKYNLRKHVRFMHLEGGQVFRCDLCPHESPNSRALLDH 505

  Fly   568 IYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAE 632
            ....|:.|| |.|.:|.|.|||...|:||.::|||:.||.|..|...|.||||.|.||:..|..|
Mosquito   506 KKRVHVVER-FACELCGKRFKRKLYLKEHIASHTGQPLYECGICDAKFNSNANCYNHRKSKHPEE 569

  Fly   633 W--------EADRKKPLPPNIMKISQGATTAMKKRQTS 662
            |        ||.||.|            .:.:||.:.|
Mosquito   570 WQARRQAFFEAQRKAP------------DSELKKEEIS 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262 20/73 (27%)
C2H2 Zn finger 334..355 CDD:275368 8/20 (40%)
LIM <361..407 CDD:413332 14/46 (30%)
C2H2 Zn finger 365..382 CDD:275368 5/16 (31%)
C2H2 Zn finger 390..410 CDD:275368 6/20 (30%)
C2H2 Zn finger 427..443 CDD:275368 5/15 (33%)
COG5236 <455..>574 CDD:227561 40/123 (33%)
C2H2 Zn finger 458..476 CDD:275368 7/17 (41%)
C2H2 Zn finger 487..507 CDD:275368 7/19 (37%)
C2H2 Zn finger 521..540 CDD:275368 5/18 (28%)
C2H2 Zn finger 551..572 CDD:275368 9/20 (45%)
C2H2 Zn finger 580..600 CDD:275368 9/19 (47%)
C2H2 Zn finger 608..629 CDD:275368 10/20 (50%)
LOC4576343XP_001237668.2 None

Return to query results.
Submit another query.