DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and CG17801

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_650660.2 Gene:CG17801 / 42144 FlyBaseID:FBgn0038550 Length:381 Species:Drosophila melanogaster


Alignment Length:319 Identity:79/319 - (24%)
Similarity:117/319 - (36%) Gaps:57/319 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 EDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSREEIERRKLQQDEYD-EIILQ 327
            ||.:.::.|||||...:::........:.|...:|.....:.|:....:||....:.|| |..|.
  Fly    87 EDLESTVSDIEPEGDSSDLESEESYDSENYPFDKKAEESDIDLNLAHEDRRNEPHNPYDSETPLI 151

  Fly   328 FFKKFPC----SLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFHLR---------KALA--- 376
            |..|.|.    |..|..:.|..|.:..::      ..:|: .|....|.         |.||   
  Fly   152 FKHKNPLIETPSFANENLPNKVDAKSPKK------GNFIQ-IGTDLRLLTTYPSIKVVKPLALAP 209

  Fly   377 EHVLVHKNP---------DHFMCSQCGRVFQDSRALEVHEQTHTNPEVKAEPKEKRIYQCEKCPK 432
            |.|.....|         ...:|.:|||||:....|:.|...||.        ||. :.|..|.|
  Fly   210 EDVAAENVPPAKRTARKMQSLVCPKCGRVFKTPYNLKTHMVRHTG--------EKN-FPCTFCDK 265

  Fly   433 SFTTKAAMEYHDVSKHVPKSEFKYSCPECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQ 497
            .|.||.....|:..:|:.:..|:  |..|:....|......|.|..|..:....||:|.|...::
  Fly   266 RFVTKYLARLHERVRHMGEQPFE--CNFCSATFFTSTAKSSHERIRHIRDLRYQCDQCTKRFNTK 328

  Fly   498 TNLKKHHELEHSEKPRPKPDPVQCEICGTWLRHLSGLKQHMKTV-HEP------PGDEH 549
            |.|.||..|....|      |..|.||.......:.|:.|..:| |:.      ..:||
  Fly   329 TCLNKHKFLHSGLK------PFDCVICQINFARKATLRSHFDSVAHQKRASAILESEEH 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 4/24 (17%)
LIM <361..407 CDD:413332 16/66 (24%)
C2H2 Zn finger 365..382 CDD:275368 7/28 (25%)
C2H2 Zn finger 390..410 CDD:275368 8/19 (42%)
C2H2 Zn finger 427..443 CDD:275368 6/15 (40%)
COG5236 <455..>574 CDD:227561 26/102 (25%)
C2H2 Zn finger 458..476 CDD:275368 4/17 (24%)
C2H2 Zn finger 487..507 CDD:275368 8/19 (42%)
C2H2 Zn finger 521..540 CDD:275368 5/18 (28%)
C2H2 Zn finger 551..572 CDD:275368
C2H2 Zn finger 580..600 CDD:275368
C2H2 Zn finger 608..629 CDD:275368
CG17801NP_650660.2 zf-AD 9..76 CDD:462262
zf-C2H2 231..252 CDD:395048 8/20 (40%)
C2H2 Zn finger 232..252 CDD:275368 8/19 (42%)
zf-H2C2_2 244..269 CDD:463886 10/33 (30%)
C2H2 Zn finger 260..281 CDD:275368 7/20 (35%)
C2H2 Zn finger 289..308 CDD:275368 4/18 (22%)
C2H2 Zn finger 318..338 CDD:275368 8/19 (42%)
C2H2 Zn finger 346..362 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.

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