DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and CG11247

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_649351.2 Gene:CG11247 / 40414 FlyBaseID:FBgn0037120 Length:522 Species:Drosophila melanogaster


Alignment Length:495 Identity:111/495 - (22%)
Similarity:181/495 - (36%) Gaps:120/495 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 PPKAKPESAPSPKKELDSEDGEENARDNNDMEFVAPEAVLGTDDSSSSSSESSGEDSDHSLPDIE 274
            ||.|: ||:|.|...:        .|..:.:..:....|   |:......|...:|.|:..|.::
  Fly    27 PPAAR-ESSPGPTLAI--------KRRKSSLASLRDACV---DEEEDDGGEQDSKDDDYVQPQLK 79

  Fly   275 PEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSREEIERRKLQQDEYDEIILQFFKKFPCSLCNL 339
            ...|..|..||                                            |...||.|:.
  Fly    80 KSARKGEPVKR--------------------------------------------KHHVCSQCSK 100

  Fly   340 LVQNFADMRRHQRVSHNIESGYIEC--CGRKFHLRKALAEHV-LVHKNPDHFMCSQCGRVFQDSR 401
            ......|::||..: |:.|..: :|  ||:.:.....|..|: ..|::...|:||||.:.|....
  Fly   101 EFGGKTDLQRHMLI-HSDERPH-KCKDCGKSYRQAVNLKNHITTAHEHRKQFVCSQCPKSFALKE 163

  Fly   402 ALEVHEQTHTNPEVKAEPKEKRIYQCEKCPKSFTTKAAMEYHDVSKHVPKSEFKYSCPECNKKIP 466
            .|.:|.:.|:.         ::.|.|:.|.|.|.....::.|.||.|....: :::|.:|:....
  Fly   164 RLRLHMRLHSG---------EKPYPCDLCDKKFARGGQLQQHMVSHHKTSIQ-QFNCTKCSASFS 218

  Fly   467 TERKLKEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPR-----------PKPDPVQ 520
            |...|:.|:. .|:......|..|.....::..|:.|...||.:..:           |..|...
  Fly   219 TNANLRVHME-RHEQGMEHRCSICENQFANELALRAHINQEHHKLTQFECEICHKMIEPDEDLAT 282

  Fly   521 ------------CEICGTWLRHLSGLKQHMKTVH--EPPGDEHRCHICNKTSTNSRALKRHIYHN 571
                        ||:|.|:....|....||: :|  |.|   ::|.||::|..:|..||.|| ..
  Fly   283 HMQRHTAVKTHVCEVCNTYFTQKSQYNVHMR-MHTGERP---YQCRICHQTFAHSSVLKLHI-RK 342

  Fly   572 HLCERKFKCGMCEK--AFKRPQDLREH-TSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEW 633
            |..|:.|:|.:||.  ||.:...|:.| ...|..:..|.|..|...|.....:..|.:  |.|:.
  Fly   343 HTGEKPFRCQLCEDEVAFSQLAHLKNHMKKIHKQQKPYMCEGCHDFFKIKVELQSHVE--HCAKC 405

  Fly   634 EADRKKP-------------LPPNIMKISQGATTAMKKRQ 660
            ..|..||             |..|:..:.:..::|.|.||
  Fly   406 PVDGDKPSGNQSEDAQILSVLRFNMAVVLKKISSAQKLRQ 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 6/20 (30%)
LIM <361..407 CDD:413332 13/48 (27%)
C2H2 Zn finger 365..382 CDD:275368 4/17 (24%)
C2H2 Zn finger 390..410 CDD:275368 7/19 (37%)
C2H2 Zn finger 427..443 CDD:275368 4/15 (27%)
COG5236 <455..>574 CDD:227561 34/143 (24%)
C2H2 Zn finger 458..476 CDD:275368 5/17 (29%)
C2H2 Zn finger 487..507 CDD:275368 4/19 (21%)
C2H2 Zn finger 521..540 CDD:275368 7/18 (39%)
C2H2 Zn finger 551..572 CDD:275368 9/20 (45%)
C2H2 Zn finger 580..600 CDD:275368 7/22 (32%)
C2H2 Zn finger 608..629 CDD:275368 4/20 (20%)
CG11247NP_649351.2 COG5048 <88..247 CDD:227381 43/215 (20%)
C2H2 Zn finger 95..115 CDD:275368 6/20 (30%)
C2H2 Zn finger 123..144 CDD:275368 5/20 (25%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
C2H2 Zn finger 180..200 CDD:275368 6/19 (32%)
COG5048 <192..369 CDD:227381 46/183 (25%)
C2H2 Zn finger 210..230 CDD:275370 5/20 (25%)
C2H2 Zn finger 238..260 CDD:275371 5/21 (24%)
C2H2 Zn finger 267..287 CDD:275368 2/19 (11%)
C2H2 Zn finger 295..315 CDD:275368 7/20 (35%)
C2H2 Zn finger 323..343 CDD:275368 9/20 (45%)
C2H2 Zn finger 351..374 CDD:275368 7/22 (32%)
C2H2 Zn finger 382..399 CDD:275368 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.

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