DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and CG8388

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_611075.1 Gene:CG8388 / 36763 FlyBaseID:FBgn0034062 Length:572 Species:Drosophila melanogaster


Alignment Length:688 Identity:201/688 - (29%)
Similarity:307/688 - (44%) Gaps:156/688 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CVLC---LDSSNAGYGLQSEEGVRLNIRATIHKHFAFSEVLTAGGDAEVCRECWNCVSSFEEFHQ 65
            |.||   :|.:.......|||...|.:|..|.||| :.::..:.....||..||..:..|..|:.
  Fly     3 CFLCTQTVDDAAGNIEFASEEADSLGLRCIIEKHF-WLQIPDSKRAGYVCGPCWEQLLLFHNFYL 66

  Fly    66 RVSCLHRQRSSDSKSEPIEFCGQTEEAIINPLYSVELDALAEAFFAPSEVKVEVNELEPLPKVEL 130
            .|...|:                          ::|...|.|.  :|.||.....|         
  Fly    67 NVEQAHK--------------------------ALEQTVLKET--SPPEVVASALE--------- 94

  Fly   131 LEDPVKTEIRTAPKRLGVPNEGSPHSKRRIKNELPVDSDSDAPLADFLNSDSKRSSVGPAKNSEA 195
             |..||:|                                        :.||..::|        
  Fly    95 -EHIVKSE----------------------------------------HDDSVAAAV-------- 110

  Fly   196 NKGRQLRRSARRGRPPKAKPESAPSPKKELDSEDGEENARDNNDMEFVAPEAVLGTDDSSSSSSE 260
                    ..|||||.|...:.|   ::||.|...:.|.   |:::...|||.|...|......|
  Fly   111 --------KRRRGRPRKVAQQDA---REELKSVLEQINL---NEIKIEFPEADLTIADVLEDQEE 161

  Fly   261 SSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSREEIERRKLQ-------- 317
            ..      .|||....:..||.|:.:..||...::         ::|.....||::|        
  Fly   162 QD------FLPDDCISKEGAEDPEVLEKKPPTLKR---------KVSGRSRGRRRVQLAERPNTS 211

  Fly   318 -------QDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFHLRKAL 375
                   ..|:::.|.:.: |..|.:|||.:::|::|..|.|..|. :.||..||.|||..|..|
  Fly   212 CLPKIQKSQEFNDYIREHY-KVQCHICNLPMEDFSEMLAHVRREHK-QRGYAMCCNRKFLKRGVL 274

  Fly   376 AEHVLVHKNPDHFMCSQCGRVFQDSRALEVHEQTHTNPEVKAEPKEKRIYQCEKCPKSFTTKAAM 440
            .:|:..|::|:.|.||.||||....|:||:|.:.|   |:|:   ..|:|:||:|.|:|.:....
  Fly   275 VDHLRRHQDPETFKCSICGRVMGHRRSLELHMRMH---EIKS---RGRLYRCEQCSKAFYSAVVY 333

  Fly   441 EYHDVSKHVPKSEFKYSCPECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHHE 505
            |.|.:: |:|:.::|..|..|.|..|::..:::|::.:|....|.|||.|||::|.:..|.:|.|
  Fly   334 ERHKLT-HIPREQWKVPCTHCEKTYPSQYTMQQHVKLVHLNLYAKICDVCGKSIRGREALARHME 397

  Fly   506 LEHSEKPRPKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPG-DEHRCHICNKTSTNSRALKRHIY 569
             ||:..|:.   .::|.:|.:.|....||.:|:|.:|.... ...:|..|.|...:.:|.:.||.
  Fly   398 -EHTGGPQA---AIKCHLCDSMLTTKYGLARHIKMMHTAENLQPMQCEFCLKICPSLQAHQHHIK 458

  Fly   570 HNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWE 634
            :.|...|..:|.|||||||||.:|:||.:|||||||||||:||.||.|||||:.||:::||.|||
  Fly   459 YTHNTARSHQCPMCEKAFKRPNELKEHMTTHTGEVLYTCPHCPQTFNSNANMHAHRKKVHRKEWE 523

  Fly   635 ADRKKPL-----PPNIMKISQGATTAMKKRQTSGALFP 667
            .:|.|.|     ...|:.:|...||..::   .|.|.|
  Fly   524 ENRHKRLNRSRKSDTIIAVSVRKTTETRQ---DGGLVP 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262 21/75 (28%)
C2H2 Zn finger 334..355 CDD:275368 8/20 (40%)
LIM <361..407 CDD:413332 21/45 (47%)
C2H2 Zn finger 365..382 CDD:275368 7/16 (44%)
C2H2 Zn finger 390..410 CDD:275368 10/19 (53%)
C2H2 Zn finger 427..443 CDD:275368 6/15 (40%)
COG5236 <455..>574 CDD:227561 36/119 (30%)
C2H2 Zn finger 458..476 CDD:275368 5/17 (29%)
C2H2 Zn finger 487..507 CDD:275368 9/19 (47%)
C2H2 Zn finger 521..540 CDD:275368 6/18 (33%)
C2H2 Zn finger 551..572 CDD:275368 6/20 (30%)
C2H2 Zn finger 580..600 CDD:275368 13/19 (68%)
C2H2 Zn finger 608..629 CDD:275368 13/20 (65%)
CG8388NP_611075.1 zf-AD 3..78 CDD:462262 22/101 (22%)
C2H2 Zn finger 264..281 CDD:275368 7/16 (44%)
C2H2 Zn finger 289..309 CDD:275368 10/19 (53%)
C2H2 Zn finger 320..340 CDD:275368 7/20 (35%)
C2H2 Zn finger 350..369 CDD:275368 5/18 (28%)
C2H2 Zn finger 440..461 CDD:275368 6/20 (30%)
C2H2 Zn finger 469..489 CDD:275368 13/19 (68%)
C2H2 Zn finger 497..515 CDD:275368 12/17 (71%)

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