DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and CG30020

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:800 Identity:151/800 - (18%)
Similarity:244/800 - (30%) Gaps:281/800 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 EPLPKVELLEDPVKTEIRTAPKR--LGVPNEGSPHSKRRIKNELPVDSDSDAPLADFLNSDSKRS 185
            :|:|......:|:.|...|..:.  :.|..:.:|.......|.|.|  .:.||:.      :...
  Fly   526 QPMPDPMQQTEPMATTSTTITESGDINVVVDATPLFYAATSNSLLV--TNPAPVT------TVEE 582

  Fly   186 SVGPAKN------SEANKGRQLRRSARRGRPPKAKPES-----------------APSPKKELDS 227
            :.|.|.|      .|.::|......|.:..|..:...|                 ...|...:..
  Fly   583 TTGTASNHAFGIFPEISEGNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPV 647

  Fly   228 EDGEENARDNN-------------DMEFVAPEAVLGTDDSSSSSSESSGEDS-----------DH 268
            .||::...|||             |.|....:.|...:|.:.:..|:...|:           |.
  Fly   648 VDGDDIVIDNNNISLDFDAENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNLLLTSDDD 712

  Fly   269 SLPDIEPEE-RYAEIPKRVVVKPK------------------KYR--------KREKPLVPPVRL 306
            .:.|.:.|: ::.:.|..:....|                  .||        ..::.|:...:.
  Fly   713 DVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKT 777

  Fly   307 SREEIERRKLQQDEYDEIIL---QFFKKFP---------CSLCNLLVQNFADMRRHQRVSHNIES 359
            ..:.:..|.:.|.:.|::.:   ...|.:|         |:.|....::.::||:|....|.|..
  Fly   778 VHKRMPTRDMVQAKGDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGIND 842

  Fly   360 GY--------------IEC--CGRKFHLRKALAEHV--------LVHKNPDHFMCSQCGRVFQDS 400
            |.              .||  |.|.|..:..|:.|:        ::.....|     ||.....:
  Fly   843 GVSEHANEVFIIRKLPFECPRCIRSFAAKTTLSRHLQRSHLVDTIIEMQTPH-----CGEAITTT 902

  Fly   401 RALE---VHE---------------QTHTNPE----------------------VKAEPKEKRIY 425
            .|..   :.|               ||....|                      |||||   .:.
  Fly   903 MATSSSTISEPVNSVTVDGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEP---AVP 964

  Fly   426 QCEKCP-------------------------------------KSFTT----------------- 436
            :.|..|                                     .|.||                 
  Fly   965 EEELDPVTLDAATAVTTTAIAAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRD 1029

  Fly   437 ---KAAMEYHDVSKHVPKSEFKYSCP--ECNKKIPT-------ERKLKEHLRYMHDPEAAI-ICD 488
               :::...|||||.: ......|||  |..|.:.|       .:.|:.:.| :|  .::| ||.
  Fly  1030 EAQQSSPNIHDVSKAL-SDNASSSCPINESYKLLSTTALETSPAKGLRSNSR-LH--RSSIHICK 1090

  Fly   489 KCGKTLRSQTNLKKHHELEHSEKPRPK-PDPVQCEICGTWLRHLSGLKQHMK------------- 539
            .|.:|......|.||....||...|.: ....:|.||.|..|.|:.||.|||             
  Fly  1091 LCNQTFDELGKLVKHEMELHSNTERSRWGYQHKCAICNTSYRTLTLLKFHMKRHSNRKSQCKLCP 1155

  Fly   540 ----TVHEPPGDEH-----------RCHI--CNKTSTNSRALKRHIYHNHLCERKFKCGMCEKAF 587
                |:.|.  :.|           ||.:  |.||......|.||...:||..| :.|.:|.|..
  Fly  1156 KSFVTIAEL--ERHTKAKHSKDKTLRCFMDGCRKTFAFKHHLIRHQKASHLSTR-YICPVCNKEE 1217

  Fly   588 KRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPLP--------PN 644
            |....|:.|.|.|.||:.|.||.|..::.....:..|...:|...:..:....|.        ||
  Fly  1218 KSNVHLKNHMSVHKGEITYKCPKCDRSYLRRGRLVTHALIIHDLRFTTEELGNLSSLATNQARPN 1282

  Fly   645 IMKISQGATTAMKKRQTSGA 664
            .:|::........::..|||
  Fly  1283 DLKVATPVGLLDGRKDVSGA 1302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 5/20 (25%)
LIM <361..407 CDD:413332 11/72 (15%)
C2H2 Zn finger 365..382 CDD:275368 5/24 (21%)
C2H2 Zn finger 390..410 CDD:275368 5/37 (14%)
C2H2 Zn finger 427..443 CDD:275368 5/72 (7%)
COG5236 <455..>574 CDD:227561 43/159 (27%)
C2H2 Zn finger 458..476 CDD:275368 6/26 (23%)
C2H2 Zn finger 487..507 CDD:275368 6/19 (32%)
C2H2 Zn finger 521..540 CDD:275368 11/35 (31%)
C2H2 Zn finger 551..572 CDD:275368 7/22 (32%)
C2H2 Zn finger 580..600 CDD:275368 7/19 (37%)
C2H2 Zn finger 608..629 CDD:275368 4/20 (20%)
CG30020NP_610627.2 zf-AD 25..103 CDD:214871
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..418 CDD:275368
C2H2 Zn finger 442..460 CDD:275368
C2H2 Zn finger 730..750 CDD:275368 1/19 (5%)
C2H2 Zn finger 758..777 CDD:275368 1/18 (6%)
C2H2 Zn finger 1089..1110 CDD:275368 6/20 (30%)
C2H2 Zn finger 1124..1144 CDD:275368 11/19 (58%)
C2H2 Zn finger 1151..1172 CDD:275368 3/22 (14%)
C2H2 Zn finger 1180..1203 CDD:275368 7/22 (32%)
C2H2 Zn finger 1210..1230 CDD:275368 7/19 (37%)
C2H2 Zn finger 1238..1254 CDD:275368 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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