DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and CG10366

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_609995.1 Gene:CG10366 / 35258 FlyBaseID:FBgn0032814 Length:578 Species:Drosophila melanogaster


Alignment Length:657 Identity:143/657 - (21%)
Similarity:237/657 - (36%) Gaps:235/657 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CVLCLD---SSNAGYGLQSE---EGVRLNIRATIHKHFAFSEVLTAGGD--AEVCRECWNCVSSF 60
            |.||..   ..|....|::|   |...:.:...|.|:|..:  :|.|.:  ..:|.||.:.|:|.
  Fly    29 CRLCAKDDVQGNLNVFLKNEDSGEAASMELATAIGKYFWVN--ITRGEELPETICSECLSLVTSL 91

  Fly    61 EEFHQRVSCLHRQRSSDSKSEPIEFCGQTEEAIINPLYSVELDALAEAFFAPSEVKVEVNELEPL 125
            ..|.:|::.:.:                        ||.: |.:      .||:.:..::||.  
  Fly    92 VNFSERITRVQK------------------------LYCI-LQS------TPSQERPNLHELR-- 123

  Fly   126 PKVELLEDPVKTEIRTAPKRLGVPNEGSPHSKRRIKNELP-VDSDSDAPLADFLNSDSKRSSVGP 189
            .|..||::..:||:....|            |.::..:|. :..:|...||:.|..:.|:.||..
  Fly   124 SKFGLLDEETQTEVHYVDK------------KPKLDEQLEFLPEESPYELANPLTPEEKQESVDQ 176

  Fly   190 AKNSEANKGRQLRRSARRGRPPKAKPESAPSPKKELDSEDGEENA-----------RDNNDMEFV 243
            .::.                 |..:|:     :::.|.|..|:..           .||:.    
  Fly   177 EQDQ-----------------PTEEPD-----EQDADYEPNEDRVLMSLCDVYGIQEDNSS---- 215

  Fly   244 APEAVLGTDDSSSSSSESSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSR 308
                 .|:.|.||.|:|.:|||:..|                           ||          
  Fly   216 -----AGSLDGSSPSTEKAGEDAADS---------------------------EK---------- 238

  Fly   309 EEIERRKLQQDEYDEIILQFFKKFPCSLCNLLVQNFADMRRHQRVSHNIESGYIECCGRKFHLRK 373
                                                    |||                      
  Fly   239 ----------------------------------------RHQ---------------------- 241

  Fly   374 ALAEHVLVHKNPDHFMCSQCGRVFQDSRALEVH-EQTHTNPEVKAEPKEKRIYQCEKCPKSFTTK 437
                            |::|.|.:..|:.|:.| .|.|.    :.||..::: ||..|||.|...
  Fly   242 ----------------CNECLRSYATSKTLQRHLRQDHG----QTEPTTEQL-QCPDCPKKFRLH 285

  Fly   438 AAMEYHDVSKHVPKSEFK-YSCPECNKKIPTERKLKEHLRYMHDPE--AAIICDKCGKTLRSQTN 499
            ..:|.| :..|||..:.| |:|..|:||..|....::|.:|||..|  ..:||::||..:.|.:.
  Fly   286 YQLERH-MKWHVPLPKRKQYACSSCDKKFATSASAQQHEQYMHLDERPRPVICEQCGVGVHSMSA 349

  Fly   500 LKKHHELEHSEKPRPKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPGDEHRCHICNKTSTNSRAL 564
            ||: |.|:|::..     |.:||:|....:..:.||.|.:| |:|  .::.|..|.....:...|
  Fly   350 LKE-HVLKHTDYA-----PFECEVCKKCFKSANRLKHHKET-HDP--HKYICPECGMQLNSRTTL 405

  Fly   565 KRH-IYHNHLCERKFKCGMCEKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRL 628
            .|| :.|..  :.:.||..|.:.|||.:.|:.|...|||...|:|..|..||.:.:|...|:::.
  Fly   406 NRHRLVHTD--QMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKS 468

  Fly   629 HRAEWEA 635
            |..|..|
  Fly   469 HPEELAA 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262 19/80 (24%)
C2H2 Zn finger 334..355 CDD:275368 3/20 (15%)
LIM <361..407 CDD:413332 6/46 (13%)
C2H2 Zn finger 365..382 CDD:275368 0/16 (0%)
C2H2 Zn finger 390..410 CDD:275368 7/20 (35%)
C2H2 Zn finger 427..443 CDD:275368 6/15 (40%)
COG5236 <455..>574 CDD:227561 38/122 (31%)
C2H2 Zn finger 458..476 CDD:275368 6/17 (35%)
C2H2 Zn finger 487..507 CDD:275368 7/19 (37%)
C2H2 Zn finger 521..540 CDD:275368 6/18 (33%)
C2H2 Zn finger 551..572 CDD:275368 6/21 (29%)
C2H2 Zn finger 580..600 CDD:275368 7/19 (37%)
C2H2 Zn finger 608..629 CDD:275368 6/20 (30%)
CG10366NP_609995.1 zf-AD 28..108 CDD:462262 21/105 (20%)
COG5048 <222..408 CDD:227381 69/315 (22%)
C2H2 Zn finger 242..263 CDD:275368 7/20 (35%)
C2H2 Zn finger 275..295 CDD:275368 7/20 (35%)
C2H2 Zn finger 306..357 CDD:275368 19/51 (37%)
C2H2 Zn finger 365..385 CDD:275368 7/20 (35%)
C2H2 Zn finger 392..412 CDD:275368 5/19 (26%)
SUF4-like 418..>485 CDD:411020 21/58 (36%)
C2H2 Zn finger 420..445 CDD:411020 10/24 (42%)
C2H2 Zn finger 420..440 CDD:275368 7/19 (37%)
C2H2 Zn finger 448..469 CDD:411020 6/20 (30%)
C2H2 Zn finger 448..466 CDD:275368 6/17 (35%)

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