DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4707 and sdz-38

DIOPT Version :10

Sequence 1:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_496158.1 Gene:sdz-38 / 191448 WormBaseID:WBGene00014131 Length:202 Species:Caenorhabditis elegans


Alignment Length:87 Identity:20/87 - (22%)
Similarity:30/87 - (34%) Gaps:7/87 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 PKPDPVQCEICGTWLRHLSGLKQHMKTVHEPPGDEHRCHICNKTSTNS----RALKRHIYHNHLC 574
            ||.:...|..|.........:.:|...:|.   ..|.|.||......:    .::|:|:.|.|..
 Worm     7 PKSEAPICGYCQLTFSQTGSMTRHRDRLHT---KNHTCLICVSNCEGAPILGESIKKHLQHAHGY 68

  Fly   575 ERKFKCGMCEKAFKRPQDLREH 596
            .....|..|...|:....||.|
 Worm    69 VDVQSCSCCHWIFENKIQLRTH 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368
LIM <361..407 CDD:413332
C2H2 Zn finger 365..382 CDD:275368
C2H2 Zn finger 390..410 CDD:275368
C2H2 Zn finger 427..443 CDD:275368
COG5236 <455..>574 CDD:227561 14/63 (22%)
C2H2 Zn finger 458..476 CDD:275368
C2H2 Zn finger 487..507 CDD:275368
C2H2 Zn finger 521..540 CDD:275368 3/18 (17%)
C2H2 Zn finger 551..572 CDD:275368 6/24 (25%)
C2H2 Zn finger 580..600 CDD:275368 6/17 (35%)
C2H2 Zn finger 608..629 CDD:275368
sdz-38NP_496158.1 None
Blue background indicates that the domain is not in the aligned region.

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