DRSC/TRiP Functional Genomics Resources

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Protein Alignment Samtor and samtor

DIOPT Version :10

Sequence 1:NP_611943.1 Gene:Samtor / 37934 FlyBaseID:FBgn0035035 Length:302 Species:Drosophila melanogaster
Sequence 2:XP_012814401.1 Gene:samtor / 496879 XenbaseID:XB-GENE-999766 Length:414 Species:Xenopus tropicalis


Alignment Length:336 Identity:99/336 - (29%)
Similarity:160/336 - (47%) Gaps:58/336 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EHQRLASIVKSCHESLRQLTKEYGATAA---------------WQEHTSPRNAKQLAEYAKAMKQ 54
            |.::|:.:||..|..||:..:|..:.:|               |.||...:.  :|.|||.|||.
 Frog    36 EQEKLSGVVKRVHRDLRKKYREGISESAVQGTRHTKAGDFEKIWLEHCKDKG--RLCEYAVAMKA 98

  Fly    55 LAAIWETNDGKVELQARSRIKWAIDYITKYFFTEGIYLQKRQREQ--------RLLESYRAEGKL 111
            ||    .|....:.:...||:|.:....:|||..|   :|:..|:        :|.....||..:
 Frog    99 LA----DNHWAKKCEGEGRIEWCLGVCQEYFFNGG---KKKAIEKDARRATLNKLQSPNHAEDGV 156

  Fly   112 GEVQCRLMEEPPD-----RLHVLDVGSCFNPFSSAPHLEVTALDLCPATEDVLQADFLKVEV--- 168
            .:.....::...|     ::.:||||||:|||..........:|:.||.|.|.:.|||.:::   
 Frog   157 SDFSVPNIKPLNDEYMTGKIRLLDVGSCYNPFLKYEDFLAVGIDIVPAVETVCKCDFLNLQIQRP 221

  Fly   169 ---VPGIREPELE--EGSVRRLPASHYECVIFSLLLEYMPSAEQRLQCCLQAYDLLLPEGILVLI 228
               .|...:..|:  |..:..|||..:..|:|||||.|.||..||..||.:|::||...|:|::|
 Frog   222 LQFAPDAIDAFLKQLESPIDYLPAELFHVVVFSLLLSYFPSPYQRWICCKKAHELLTLNGLLLII 286

  Fly   229 TPDSQHVGKNAHLMKNWRYSLARIGLLRVRFEKLPHISCMVFR----KAISRELSQHWASIHREE 289
            ||||.|..::|.:||:|:.::..:|..|:.:.|..|:..|.||    |..|..::.::..:    
 Frog   287 TPDSSHQNRHAVMMKSWKIAIESLGFRRMTYSKFSHMHLMAFRKTSLKTTSDLITMNYPDM---- 347

  Fly   290 GMCEEIRIPQD 300
                 :.||||
 Frog   348 -----LYIPQD 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SamtorNP_611943.1 UbiG 118..231 CDD:441829 44/125 (35%)
samtorXP_012814401.1 None

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