DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3565 and Efcab1

DIOPT Version :9

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_006522537.1 Gene:Efcab1 / 66793 MGIID:1914043 Length:244 Species:Mus musculus


Alignment Length:155 Identity:42/155 - (27%)
Similarity:68/155 - (43%) Gaps:34/155 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LMELLFEIVDRDLIATIVYRIAHTPGSRPPDFFSDKHIHLESFVRLFTVYFTKDLQLKMEFAFSV 131
            ::.:.|.:.| |:|...|:|     |.   |..:|..|.:..::...:::....|..||::.|.|
Mouse    57 ILHVTFGMTD-DMIMDRVFR-----GF---DKDNDGCISVSEWIHGLSLFLRGTLDEKMKYCFEV 112

  Fly   132 YDKSDSKQLNGEQVGFFVGK--FF-----------ESEDEDESIELRLDMKEMLFLKFDLDKDTN 183
            :|      |||:.   |:.|  .|           ..||.||.|:   |:.|:...|.|.|.|..
Mouse   113 FD------LNGDG---FISKEEMFHMLKNSLLKQPSEEDPDEGIK---DLVEITLKKMDHDHDGK 165

  Fly   184 IGVDEYYEVVRRQPMLLECFGRVFP 208
            :...:|.:.||.:.:|||.||...|
Mouse   166 LSFVDYEKAVREENLLLEAFGPCLP 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
Efcab1XP_006522537.1 FRQ1 <49..175 CDD:227455 34/138 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1331864at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.980

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