DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG3565 and Chp1

DIOPT Version :9

Sequence 1:	NP_611942.1	Gene:	CG3565 / 37933	FlyBaseID:	FBgn0035034	Length:	244	Species:	Drosophila melanogaster
Sequence 2:	NP_062743.1	Gene:	Chp1 / 56398	MGIID:	1927185	Length:	195	Species:	Mus musculus

Alignment Length:	181	Identity:	40/181 - (22%)
Similarity:	68/181 - (37%)	Gaps:	60/181 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    22 KDIARLAKDSIFSHNELISIVMLYHKFVLV----NG--PRAKYMTIQQLSALMELLFEIVDRDLI 80
            :::..:.|::.|||::   |..||.:|..:    ||  .|..:..|.:|:     :..:.||.:.
Mouse    12 EELEEIKKETGFSHSQ---ITRLYSRFTSLDKGENGTLSREDFQRIPELA-----INPLGDRIIN 68

  Fly    81 ATIVYRIAHTPGSRPPDFFS--DKHIHLESFVRLFTVYFTKDLQLKMEFAFSVYDKSDSKQLNGE 143
            |                |||  :..::...|:|.. .:|.           .:.|...||.:||
Mouse    69 A----------------FFSEGEDQVNFRGFMRTL-AHFR-----------PIEDNEKSKDVNG- 104

  Fly   144 QVGFFVGKFFESEDEDESIELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVR 194
                           .|.:..|.:.....|..:|||||..|..||..:|:|
Mouse   105 ---------------PEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLR 140

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3565	NP_611942.1	None
Chp1	NP_062743.1	Nuclear export signal 2. /evidence=ECO:0000250	176..185
		FRQ1	1..182	CDD:227455	40/181 (22%)
		Necessary for association with microtubule and interaction with GAPDH. /evidence=ECO:0000250	2..6
		Nuclear export signal 1. /evidence=ECO:0000250	138..147		2/3 (67%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0034
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900