DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3565 and 1700109H08Rikl

DIOPT Version :10

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_006236139.1 Gene:1700109H08Rikl / 500007 RGDID:1588445 Length:217 Species:Rattus norvegicus


Alignment Length:168 Identity:41/168 - (24%)
Similarity:70/168 - (41%) Gaps:25/168 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LMELLFEIVDRDLIATIVYRIAHTPGSRPPDFFSDKHIHLESFVRLFTVYFTKDLQLKMEFAFSV 131
            ||..:|.:.|:|                     .|.|::|:.:::...|:.....:.||.|.|.|
  Rat    68 LMNRVFFVFDKD---------------------GDSHVNLQEWIKGLAVFLRGTFEEKMRFCFEV 111

  Fly   132 YDKSDSKQLNGEQV-GFFVGKFFESEDEDESIELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVRR 195
            |..|....::.|:: .......|.:..|:|:.|...|:.|:...|.|.|.|..|..:::.:.||:
  Rat   112 YYLSGDAYISREKIFDMLKSSLFHNSPEEENEEGIKDLVEISLKKMDYDNDGKISFEDFEKAVRK 176

  Fly   196 QPMLLECFGRVFPPNP---QMEVLALCANVMSWFDDSP 230
            ..:|||.||...|...   ..|.|....|..:.|:.:|
  Rat   177 DGLLLEAFGPCLPDAKTCFHFEALVFKNNSPASFEHNP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
1700109H08RiklXP_006236139.1 FRQ1 <66..176 CDD:444056 29/128 (23%)

Return to query results.
Submit another query.