DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3565 and kcnip1b

DIOPT Version :10

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_021334841.1 Gene:kcnip1b / 494089 ZFINID:ZDB-GENE-041212-57 Length:225 Species:Danio rerio


Alignment Length:214 Identity:39/214 - (18%)
Similarity:83/214 - (38%) Gaps:57/214 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LAKDSIFSHNELISIVMLYHKFVLVNGPRAKYMTIQQLSAL-------MELLFE---------IV 75
            |:||.:   ::.:.:.|:.|:      |..    ::||.|.       :::|:.         :|
Zfish    27 LSKDKV---DDELEMTMVCHR------PEG----LEQLEAQTNFSKQELQVLYRGFKNECPSGVV 78

  Fly    76 DRDLI-------------ATIVYRIAHTPGSRPPDFFSDKHIHLESFVRLFTVYFTKDLQLKMEF 127
            :.|..             :|..:.:.|...:|     ::..|..|.||...:......::.|:|:
Zfish    79 NEDTFKHIYAQFFPHGDASTYAHYLFHAFDTR-----NNGSIKFEDFVMGLSTLLRGTVRDKLEW 138

  Fly   128 AFSVYDKSDSKQLNGEQVGFFVGKFFESEDEDESIELRLDMK----EMLFLKFDLDKDTNIGVDE 188
            .|.:||.:....:|.|::...|...::...:.....|:.|:.    :..|.|.|.:||..:.::|
Zfish   139 TFHLYDINKDGFINKEEMTEIVRAIYDMMGKYTYPALKGDVPKAHVDAFFEKMDKNKDGVVTLEE 203

  Fly   189 YY------EVVRRQPMLLE 201
            :.      |.:.|...|.|
Zfish   204 FVLACQEDENMMRSMQLFE 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
kcnip1bXP_021334841.1 FRQ1 <99..210 CDD:444056 22/115 (19%)

Return to query results.
Submit another query.