DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3565 and elm

DIOPT Version :10

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_649568.1 Gene:elm / 40695 FlyBaseID:FBgn0037358 Length:189 Species:Drosophila melanogaster


Alignment Length:191 Identity:41/191 - (21%)
Similarity:82/191 - (42%) Gaps:43/191 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KDIARLAKDSIFSHNELISIVMLYHKFVLVNGPRAKYMTIQQLSALMELLFEIVDRDLIATIVYR 86
            ::||::.:::.|:.|:   |..||.:|..::......::.:.|..:.||        .|..:..|
  Fly    12 EEIAQIQEETGFTPNQ---IERLYSRFTSLDRNDCGTLSREDLMRIPEL--------AINPLCER 65

  Fly    87 IAHTPGSRPPDFF---SDKHIHLESFVRLFTVYF-----TKDLQL-----KMEFAFSVYDKSDSK 138
            |.|:       ||   :|..::...|:.:. .:|     .|..:|     |::|||.:||..|..
  Fly    66 IVHS-------FFAESNDDRVNFRQFMNVL-AHFRPLRDNKQSKLNSREEKLKFAFKMYDLDDDG 122

  Fly   139 QLNGEQ----VGFFVGKFFESEDEDESIELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVRR 195
            .::.::    :...||... |:|:..||      .|...|:.||.....|..:::.:.:.|
  Fly   123 VISRDELLSILHMMVGANI-SQDQLVSI------AERTILEADLCCQGKISFEDFCKALDR 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
elmNP_649568.1 FRQ1 27..174 CDD:444056 36/172 (21%)

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