DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3565 and chp1

DIOPT Version :10

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_956009.1 Gene:chp1 / 325361 ZFINID:ZDB-GENE-030131-4086 Length:194 Species:Danio rerio


Alignment Length:181 Identity:40/181 - (22%)
Similarity:65/181 - (35%) Gaps:61/181 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KDIARLAKDSIFSHNELISIVMLYHKFVLV----NG--PRAKYMTIQQLSALMELLFEIVDRDLI 80
            :||..:.|::.|||::   |..||.:|..:    ||  .|..:..|.:|:     :..:.||.:.
Zfish    12 EDIEEIKKETGFSHSQ---ITRLYSRFHSLDKGENGGLSREDFQRIPELA-----INPLGDRIIN 68

  Fly    81 ATIVYRIAHTPGSRPPDFF--SDKHIHLESFVRLFTVYFTKDLQLKMEFAFSVYDKSDSKQLNGE 143
            |                ||  .:..::...|:|.. .:|.           .|.|...:|.|.||
Zfish    69 A----------------FFPEGEDQVNFRGFMRTL-AHFR-----------PVEDNEKNKDLTGE 105

  Fly   144 QVGFFVGKFFESEDEDESIELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVR 194
            .:.....|..                 ..|..:|||:|..|..||..:|:|
Zfish   106 PLNSRTNKLL-----------------FAFRLYDLDRDDKISRDELLQVLR 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
chp1NP_956009.1 FRQ1 27..181 CDD:444056 34/166 (20%)
EFh 113..179 CDD:238008 11/44 (25%)

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