DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3565 and pbo-1

DIOPT Version :9

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_497601.1 Gene:pbo-1 / 175385 WormBaseID:WBGene00003941 Length:196 Species:Caenorhabditis elegans


Alignment Length:186 Identity:40/186 - (21%)
Similarity:70/186 - (37%) Gaps:60/186 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 IVMLYHKFVLVNGPRAK-----YMTIQQLSALMELLFEIVDRDLIATIVYRIAHTP-GSRPPD-F 98
            |:.||.:|:.:...|.|     ::|.....::.||                 ...| |.|..| |
 Worm    27 ILKLYGRFISLATHRDKTTNEYFLTKGDFQSIAEL-----------------KQNPLGDRIIDAF 74

  Fly    99 FSD------KHIHLESFVRLFTVYFT----------KDLQLKMEFAFSVYD--------KSDSKQ 139
            |:|      :.::.:.||::.: :|.          ...:.|:.|||::||        |.:.:.
 Worm    75 FADAEVLERRKVYFKDFVKVLS-HFRPINKNKPHPWNSREAKLRFAFTMYDLNKSGTITKDEFQD 138

  Fly   140 LNGEQVGFFVGKFFESEDEDESIELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVRR 195
            :....:|..|.|     |:..||..| .|:|.     |.|.|..|...|:...:.:
 Worm   139 ILAMMIGVGVPK-----DQVNSIADR-TMREA-----DRDGDGFITFQEFCNAMEK 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
pbo-1NP_497601.1 EFh 115..181 CDD:238008 21/76 (28%)
EF-hand_7 116..181 CDD:290234 20/75 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0034
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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