DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3565 and Hpcal4

DIOPT Version :10

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_778163.1 Gene:Hpcal4 / 170638 MGIID:2157521 Length:191 Species:Mus musculus


Alignment Length:188 Identity:41/188 - (21%)
Similarity:73/188 - (38%) Gaps:28/188 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LAKDSIFSHNELISIVMLYHKFVLVNGPRAKYMTIQQLSALMELLFEIVDRDLIATIVYRIAHTP 91
            |.:::.||..||    ..::|..|.:.| :..:.:::...|....|...|....|...:|.....
Mouse    16 LVQNTEFSEQEL----KQWYKGFLKDCP-SGILNLEEFQQLYIKFFPYGDASKFAQHAFRTFDKN 75

  Fly    92 GSRPPDFFSDKHIHLESFVRLFTVYFTKDLQLKMEFAFSVYDKSDSKQLNG-------EQVGFFV 149
            |....||        ..|:...:|......:.|:.:||.:||.....::..       |.:...|
Mouse    76 GDGTIDF--------REFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLEMLEIIEAIYKMV 132

  Fly   150 GKFFESEDEDESI--ELRLDMKEMLFLKFDLDKDTNIGVDEYYEVVRRQP---MLLEC 202
            |.........:.:  :.|:|   .:|.|.|.|||..|.::|:.|..:..|   :||:|
Mouse   133 GTVIMMRMNQDGLTPQQRVD---KIFKKMDQDKDDQITLEEFKEAAKSDPSIVLLLQC 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
Hpcal4NP_778163.1 FRQ1 21..177 CDD:444056 36/171 (21%)

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