DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3565 and rcvrn

DIOPT Version :10

Sequence 1:NP_611942.1 Gene:CG3565 / 37933 FlyBaseID:FBgn0035034 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_002937040.1 Gene:rcvrn / 100302393 XenbaseID:XB-GENE-973335 Length:202 Species:Xenopus tropicalis


Alignment Length:195 Identity:47/195 - (24%)
Similarity:80/195 - (41%) Gaps:26/195 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NARFNYVYMKDIARLAKDSIFSHNELISIVMLYHKFVLVNGPRAKYMTIQQLSALMELLFEIVDR 77
            |::.:.:..:.:..|..::.||..||.:    :::..|...|..: ::.||...:....|...|.
 Frog     3 NSKSSALSKEILEELQLNTKFSQEELCT----WYQSFLKECPTGR-ISKQQFEGIYSKFFPDADP 62

  Fly    78 DLIATIVYRIAHTPGSRPPDFFSDKHIHLESFVRLFTVYFTKDLQLKMEFAFSVYDKSDSKQLNG 142
            ...|..|:|...:......||       .|..:.|......|..| |:|:|||:||...:..:|.
 Frog    63 KAYARHVFRSFDSNNDGTLDF-------KEYMIALHMTSSGKANQ-KLEWAFSLYDVDGNGTINK 119

  Fly   143 EQVGFFVGKFFE---SED-----EDESI-ELRLDMKEMLFLKFDLDKDTN----IGVDEYYEVVR 194
            .:|...:...|:   :||     |||:. |.|.:.....|.|.|.||.|.    .|:....|::|
 Frog   120 SEVLEIITAIFKMINTEDQKHLPEDENTPERRTNKIWDFFGKKDNDKLTEGEFIQGIMNNKEILR 184

  Fly   195  194
             Frog   185  184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3565NP_611942.1 None
rcvrnXP_002937040.1 FRQ1 42..177 CDD:444056 37/143 (26%)
EFh 65..127 CDD:238008 18/69 (26%)

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