DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and neo

DIOPT Version :10

Sequence 1:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster


Alignment Length:479 Identity:104/479 - (21%)
Similarity:178/479 - (37%) Gaps:131/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IAALTTHAAQIPTAMKDAQSSLSDAIAAAEAEVASTSKPAVEPSVRIKCLSGSMLITIKDAPPNH 83
            :..|:.|:.   ..:.|.|....:...|:..|:.|..      :|.|:|..|.||..|:.:.   
  Fly   343 VCRLSHHSR---ATLADVQEPFLEVPEASTYELTSCY------NVTIECGGGDMLARIRTSK--- 395

  Fly    84 ETGLFSGMIYPKGLSKNSTCLSEYRDHVGSLRYKLPLR----SCNTMPKETDDGGIEFFNTIVLQ 144
               ||:|.:|.||..|:.:.     |...:|.::|.:.    .||.  :::..|  .:.|.|::|
  Fly   396 ---LFNGKVYAKGSPKSCSV-----DVKSALDFELRMNYHDLECNV--RQSTAG--RYVNDIIIQ 448

  Fly   145 PHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEE 209
            .|..::|....|..:.|.|...:.::                      ..|..||.:.|      
  Fly   449 HHDMIVTSSDLGLALACQYDLTNKSV----------------------SNGVDLDVRGD------ 485

  Fly   210 DVYDANAPTQEEDVTNNEIPMPGCHMKIYN-DEHKIADDVKIGDPLTIVISI-DKQKVYGLHVTD 272
                 ..|...|:|.   :..|...|:|.: |...:....::||||.:...| |:|..|.:.:.:
  Fly   486 -----IMPALSEEVI---VESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRE 542

  Fly   273 CIVRDGLGWGEQRLVGEDGCPMDNEIMGQF---NYTQDRLAANVTFPAHKFPYTTSVYYQCNVRL 334
            .:..||:...|..|:..:|||.|:.|||..   :.:...|.:|  |.|.|||.:..|.::..|..
  Fly   543 LVAMDGVDNSEITLIDSNGCPTDHFIMGPIYKGSVSGKMLLSN--FDAFKFPSSEVVQFRALVTP 605

  Fly   335 CALEDPTCQEAPQC-----SGK---------------------RPKRQAAADSKEEDG---LPAT 370
            |.   |:| |..||     ||:                     ||:|......|....   |..:
  Fly   606 CM---PSC-EPVQCEQEDTSGEFRSLLSYGRKRRSLNTTDDHPRPRRDIDTSKKSAPSDMLLVQS 666

  Fly   371 IEVF-----------SGLYVNENENANDSDEDAVYKEKTLDDALCVSQRTFAIAIAIAGLILMLA 424
            |::.           ||.:.:.||....::|:.        ...||:    ||.:..|..|.:|.
  Fly   667 IQITDKFGFKQDKQESGDFYDGNETTFTANEEG--------HGFCVN----AIGLITAATIFLLT 719

  Fly   425 VVAAV----LCIMARRSTKTVSNS 444
            .:|.:    .|...|:..:...:|
  Fly   720 QLAVIAIWTYCYQRRQKLQPYQHS 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_726461.1 ZP 66..349 CDD:214579 71/296 (24%)
neoNP_651733.1 PAN_1 120..197 CDD:459635
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:459635 6/32 (19%)
ZP 381..615 CDD:214579 69/290 (24%)
Blue background indicates that the domain is not in the aligned region.

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