DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cutl-4

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_507484.3 Gene:cutl-4 / 189246 WormBaseID:WBGene00012304 Length:469 Species:Caenorhabditis elegans


Alignment Length:394 Identity:92/394 - (23%)
Similarity:144/394 - (36%) Gaps:99/394 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AEVASTSKPAVEPSV----RIKCLSGSMLITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSEYRD 109
            :.:.|...|.::..:    .:.|....:.||::.:..      |.|.:|.||....|.|......
 Worm    14 SHIQSAKVPRIQNGIVGEPEVICDIKQIRITMRTSQS------FIGNLYSKGFFHKSECRVRGNS 72

  Fly   110 HVGSLRYKLPLRS-CNTMPKE-TDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAY--------K 164
            ...|:...||:.| |....|. .:..||.....::|..|...:|...|.|||:|.|        .
 Worm    73 TANSIEIVLPVDSDCGIRRKRMMNPRGILLDTIVILMFHPVFLTQTDRSYHVQCQYTESERTVTN 137

  Fly   165 SRDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDV--TNNE 227
            :.|.:|:|...|      ||:.             :|.:||         :||..:.:|  .|.:
 Worm   138 ALDVSMQPASEL------PQSI-------------QQLNDD---------SAPVCKYEVLMENAQ 174

  Fly   228 IPMPGCHMKIYNDEHKIADDVKIGDPLTIVISID--KQKVYGLHVTDCIVRDGLGWGEQRLVGED 290
            .| |..|             ..:||.:....|.|  .:::|.:.|..|:|.||.|:| |:||.|.
 Worm   175 GP-PLSH-------------ATVGDLVYHKWSCDGNNKEMYCMTVHSCVVDDGQGFG-QKLVDEH 224

  Fly   291 GCPMDNEIMGQFNYTQDRLAANVTFPAHKFPYTTSVYYQCNVRL---------CALEDPTCQEAP 346
            ||.:|..|:.:..|.:..|.|.......||....:|::.|.:|:         |.:....|:..|
 Worm   225 GCTLDAFILKELEYNEKELEAGQMSSVFKFADKPTVFFSCMIRVEMKESAEMPCVIPTEVCKNLP 289

  Fly   347 QCSGKRPKRQAAADSKEEDGLPATI------------EVFSGLYVNENENANDSDEDAVYKEKTL 399
              |.|........|.|..|.:|...            :.||       .:|..|:.|  |....|
 Worm   290 --SSKMQNLDVMTDRKVSDDIPPGFPRPQNNTKLQKSQKFS-------TDAMTSNSD--YSADFL 343

  Fly   400 DDAL 403
            ||.|
 Worm   344 DDEL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 74/305 (24%)
Zona_pellucida <248..349 CDD:278526 31/111 (28%)
cutl-4NP_507484.3 ZP 35..278 CDD:214579 71/291 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I6139
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376126at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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