DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pio and cutl-12

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001309578.1 Gene:cutl-12 / 188735 WormBaseID:WBGene00011928 Length:569 Species:Caenorhabditis elegans


Alignment Length:368 Identity:70/368 - (19%)
Similarity:133/368 - (36%) Gaps:75/368 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VEPSVRIKCLSGSMLITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSEYRDHVGS--LRYKLPLR 121
            :||. :::|.|..:.:.|      :.||.|.|.:|.:|....:.|...|...:.:  :...||.|
 Worm    31 MEPP-KLECGSEGIRLHI------NPTGTFGGHVYVRGFFPQTVCHLNYCTRLTNRPIVMDLPFR 88

  Fly   122 S-CNT-MPKETDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQ 184
            . ||. ..:......|.:..|:::|.|...:|...:.|.:.|.|:.:::.::.:..:        
 Worm    89 GPCNVRRRRNVAPPSISYDVTVIIQHHPLFVTSFDKAYRLNCIYRQQESTLQQRINV-------- 145

  Fly   185 AFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHKIADDVK 249
                               .|:....:...|||....||.:..:..|            :.....
 Worm   146 -------------------SDIPSTALQSKNAPKCRYDVLSGSLNGP------------VVRFAN 179

  Fly   250 IGDPLTIVISIDKQKVYGLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTQDRLAANVT 314
            :||.:....:.|..: :|..|..|:|||..| .:.:.:.|.||..|..:..:.:|:.|..:|...
 Worm   180 VGDVVVHKWTCDSDR-FGFVVHSCVVRDESG-KDFQFIDERGCVTDFSLFPEVSYSDDLKSAFTA 242

  Fly   315 FPAHKFPYTTSVYYQCNVRLCALEDPTCQ--EAPQCSGKRP-----------KRQAAADSKEEDG 366
            ..|.::.....|::.|.:..|..::..|:  ..|.|   ||           |.:...:..:|.|
 Worm   243 VRAFRYADQVMVHFSCQITTCQKQENGCEGISPPIC---RPMDLGPIKVHYVKHEKNGEKFDEGG 304

  Fly   367 LPATIEVFSGLYVNENENANDSDEDAVYKEKTLDDALCVSQRT 409
            ...|:.       ...||.::.....|....|.:.|...|..|
 Worm   305 GVETLP-------PRTENTSEGSTTTVRSTTTRERAQAFSTTT 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 54/288 (19%)
Zona_pellucida <248..349 CDD:278526 23/102 (23%)
cutl-12NP_001309578.1 ZP 37..281 CDD:214579 56/293 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.