DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pio and cut-5

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001257100.1 Gene:cut-5 / 187677 WormBaseID:WBGene00011104 Length:395 Species:Caenorhabditis elegans


Alignment Length:433 Identity:79/433 - (18%)
Similarity:153/433 - (35%) Gaps:106/433 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EAEVASTSKPAVEP-----SVRI----KCLSGSMLITIKDAPPNHET-GLFSGMIYPKGLSKNST 102
            |.:.|....|:||.     .|.|    .|: |:.:|.:|     .:| ..|.|:.:.:....|..
 Worm    19 EIDNAIVGDPSVECGDDFFEVNIYHSCSCV-GNFIIKVK-----FDTRTTFHGLAFVQNHLDNPD 77

  Fly   103 CLS--EYRDHVGSLRYKLPLRSC------NTMPKETDDGGIEFFNTIVLQPHLKLITDLGRGYHV 159
            |.|  ...|...:...:|....|      :|.|:     |:.....:|:..:.:.:|...|.:.|
 Worm    78 CRSFASKTDSAKNSSLRLTFDQCAIEKRHSTSPR-----GLFLSTNVVVAFNPEFLTKNDRVFKV 137

  Fly   160 RCAYKSRDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVT 224
            :|.|      |:.::.::|..|                              .....||..    
 Worm   138 QCFY------MEMERRIQKVIQ------------------------------ISMPPPTMH---- 162

  Fly   225 NNEIPMPGCHMKIYNDEHKIADDVKIGDPL---TI--------VISIDKQKVYGLHVTDCIVRDG 278
            :.::.||.|       ::::.|....|.|:   |:        ....:.:..:.:.|..|.|.||
 Worm   163 SKQLNMPVC-------KYEVLDGSPTGPPVYFATVGQMVYHKWTCDTEHENTFCMLVHSCFVDDG 220

  Fly   279 LGWGEQRLVGEDGCPMDNEIMGQFNYTQDRLAANVTFPAHKFPYT--TSVYYQCNVRLCALED-- 339
            .|...| |:.:.||.:|..::....|..|.:|..   .||.:.|.  .::|:.|.:.:...|.  
 Worm   221 NGQRVQ-LLNDKGCALDKYLLTNLEYPTDLMAGR---EAHVYKYADRDNMYFDCQISITVKEPGL 281

  Fly   340 -----PTCQEAPQCSGKRPKRQAAADSKEEDGLPATIEVFSGLYVNENENANDSDEDAVYKEKTL 399
                 |:|.:.|:   :|......|.......:.|.||......:::....||......:.::..
 Worm   282 DYCDVPSCPDPPR---RRRSNTLPAPDDNITAIAAHIEYEDSEIISDYIIPNDDIISLNWLQRNF 343

  Fly   400 D---DALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMARRSTK 439
            |   ..||::.....:.:.:...:.::::|:.|.....|.|.|
 Worm   344 DMRISELCMTAIGTTLLVFLNAFLFIISLVSIVHVCCFRTSPK 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 57/311 (18%)
Zona_pellucida <248..349 CDD:278526 26/120 (22%)
cut-5NP_001257100.1 Zona_pellucida 53..290 CDD:421542 53/297 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376126at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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