DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cutl-3

DIOPT Version :10

Sequence 1:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_510492.2 Gene:cutl-3 / 184721 WormBaseID:WBGene00008978 Length:405 Species:Caenorhabditis elegans


Alignment Length:462 Identity:100/462 - (21%)
Similarity:180/462 - (38%) Gaps:92/462 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 FHTALHLITIAALTT-HAAQIPTAMKDAQSSLSDAIAAAEAEVASTSKPAVEPSVRIKCLSGSML 73
            ||.....:|:..... ||.||...::.                        ||.:|  |.|.|:.
 Worm     2 FHYLTTTLTVLLFCKYHAEQIDNGLQG------------------------EPLIR--CGSESLS 40

  Fly    74 ITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSEYRDHVGSLRYKLPL----RSCNTM-PKETDDG 133
            |..|      ..|.|.|.:|.||......|.::     .:|..::.|    .:|:.: .:.::..
 Worm    41 INFK------TQGAFEGHVYVKGHYSMKHCRTD-----ATLESQVNLTVSYSACDVIRQRSSNPK 94

  Fly   134 GIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQK--PQAFRSDDRREYGR 196
            ||....||::..|...||.:.:.|.|:|.|              ..|||  .|....|..:|..:
 Worm    95 GIMMTATIIISFHPMFITKIDKSYKVQCFY--------------AEAQKTVTQQLNVDIAKEQEK 145

  Fly   197 SLDKQQDDDL---------DEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHKIADDVKIGD 252
            .:.....|:.         |::.::..|.|:.||.::.| :|:|.|..::..:..  .::|....
 Worm   146 KIFVMVGDEEGGTVSHTTGDQKKLHKLNDPSTEERISYN-VPLPDCKYRVLTESK--TEEVAFAT 207

  Fly   253 PLTIVI--------SIDKQKVYGLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTQDRL 309
            ...||.        ..::...:.:.|..|.|:|..| .|.::..|:||.:|..::....|:.| |
 Worm   208 VGQIVYHEWSCEAPGQNQTSPFCVTVHSCNVKDETG-KEVQIFDENGCAVDKYLINNLEYSSD-L 270

  Fly   310 AANVTFPAHKFPYTTSVYYQCNVRL-CALEDPTC-QEAPQCSGK-RPKRQAAADSKEEDGLPATI 371
            .........||....||::||.:|| ...||.:| :.:..|... |.||.......:.|.:..|:
 Worm   271 TGGQLSQVFKFADQPSVFFQCKIRLGLKEEDGSCIRSSDHCPATLRGKRSTTLGDNDFDVISQTM 335

  Fly   372 EVFSGLYVNENENANDSDEDAVYKEKTLDDALCVSQRTFA--IAIAIAGLILMLAVVAAVLCIMA 434
            .:   |.::|...::....:..:.:..:...:|||. |.|  |.:.::.|:|:..:.:.:||.  
 Worm   336 TI---LDIDEPSKSHKKSSELQFSKLFVTSDVCVSP-TIASGIVVFVSSLLLVCLISSFLLCF-- 394

  Fly   435 RRSTKTV 441
            |..|..|
 Worm   395 RHQTVKV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_726461.1 ZP 66..349 CDD:214579 69/308 (22%)
cutl-3NP_510492.2 ZP 33..306 CDD:214579 70/304 (23%)

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