DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cutl-5

DIOPT Version :10

Sequence 1:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_495472.1 Gene:cutl-5 / 184302 WormBaseID:WBGene00017351 Length:437 Species:Caenorhabditis elegans


Alignment Length:460 Identity:94/460 - (20%)
Similarity:152/460 - (33%) Gaps:144/460 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 CLSGSMLITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRSCNTMPKETD 131
            |....::|.||.:..|...      ||..|...:..|:|..::.:.....|     |..:.::|:
 Worm    33 CEEDKIIIKIKTSMSNPSN------IYVDGRENDMECVSRNQNKIEVAHDK-----CGVVNEKTE 86

  Fly   132 --DGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQAFRSDDRREY 194
              :|.|... .|.:|.|...:|:..|.|..:|.|..            .|..|          :.
 Worm    87 QPNGSIRRL-CIFVQLHPLFVTESDRSYCAQCVYAD------------SHVMK----------DI 128

  Fly   195 GRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHKIADD------VKIGDP 253
            ..:||..:...|.....:||..             ||.|:..|    .|...|      ..|||.
 Worm   129 ESTLDISEAPPLQLSPQFDAPV-------------MPKCNYSI----RKQGKDGPPVQYASIGDS 176

  Fly   254 LTIVISIDKQKVYGLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTQDRLAANVTFPAH 318
            :..|.|.|... .|:.|.:|.|.||.| .:..::.::||.:|:.:|....|..::..|.......
 Worm   177 VFHVWSCDGNH-NGILVQNCHVEDGQG-NKILIIDQNGCGIDHYVMDTPIYNGEQSIAFQETHVF 239

  Fly   319 KFPYTTSVYYQCNVRLCALED-----------PTCQEA----------------PQCS------- 349
            ||...|...:.|.:::|...|           |:.:|.                |..|       
 Worm   240 KFAQRTVTRFICQIKICMKGDDCKRLSPPEACPSLEERFNEDPDKGKVFADEIHPPASMPSDLTG 304

  Fly   350 -----------------------GKRPKRQ--------AAADSKE---EDGLPATIEVFSGLYVN 380
                                   |..|||.        |....|:   ::|.| .:|:...|.|.
 Worm   305 PNGDTSVEFVRRAPAKGSIYYGVGYNPKRHRREILINTAPRSPKQFVMKNGYP-EMEMVGELRVF 368

  Fly   381 ENENANDSDEDAVYKEKTLDDA-----LCVSQRT--FAIAIAIAGLILMLAVVAAVLCIMAR-RS 437
            ||      .:|..|.|.....|     :|.||.:  |...:..|.::|.:.:::..|.:.:| ||
 Worm   369 EN------PQDVEYYESQRSSASATSSVCESQSSTLFFCLLVTALVVLSILLISLFLLVSSRIRS 427

  Fly   438 TKTVS 442
            .|..|
 Worm   428 GKNNS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_726461.1 ZP 66..349 CDD:214579 64/316 (20%)
cutl-5NP_495472.1 ZP 32..274 CDD:214579 62/293 (21%)

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