DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cut-4

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496242.2 Gene:cut-4 / 184037 WormBaseID:WBGene00008482 Length:507 Species:Caenorhabditis elegans


Alignment Length:342 Identity:77/342 - (22%)
Similarity:127/342 - (37%) Gaps:79/342 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 EPSVRIKCLSGSMLITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRSCN 124
            ||.|..:..|.|:|...:::        |:|.::.||.....:|::......|. |:::...||.
 Worm    38 EPEVVCETASISLLFKTRNS--------FNGKVFVKGYVSEPSCMTVGDGKTGH-RFEVRHDSCG 93

  Fly   125 TMPKETDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQAFRSD 189
             :.::.:..|:....|:::..|...||.:.|.|.|.|.|      ::..|.:..|.         
 Worm    94 -VRRQREINGVVISATVIISFHSIFITKIDRAYRVSCFY------VEGTKKVHNHV--------- 142

  Fly   190 DRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEH----KIADDVKI 250
                                   |.:|.|.:  :..:|..:|.|..:|.|:..    |.|   :|
 Worm   143 -----------------------DISALTTQ--LLESETQLPVCRYEILNEAGGSPIKYA---RI 179

  Fly   251 GDPL----TIVISIDKQKVYGLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTQDRLAA 311
            ||.:    |.|..:  :.||.:.|..|.|.||.|.....::..:||.:|..|:....||.| |.|
 Worm   180 GDQVYHKWTCVAEL--ENVYCMKVHSCTVYDGQGGPPVTVIDANGCSVDGVILQNLEYTSD-LTA 241

  Fly   312 NVTFPAHKFPYTTSVYYQCNVRL--------CALEDPTCQEAPQCSGKRPKRQAAAD----SKEE 364
            ....|..||.....:|:.|.::|        |:...|.|..:........|....|:    ...|
 Worm   242 GKLAPVFKFADKAGLYFNCQIQLTIKDVNYGCSNTQPQCPTSQYVVEPAQKTTETAEPYPYDSHE 306

  Fly   365 DGL---PATIEVFSGLY 378
            .|.   ||...|.|..|
 Worm   307 SGYPTRPANYPVASSRY 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 65/298 (22%)
Zona_pellucida <248..349 CDD:278526 31/112 (28%)
cut-4NP_496242.2 ZP 43..283 CDD:214579 65/295 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376126at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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