DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and noah-2

DIOPT Version :10

Sequence 1:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_502699.1 Gene:noah-2 / 178365 WormBaseID:WBGene00009926 Length:741 Species:Caenorhabditis elegans


Alignment Length:369 Identity:83/369 - (22%)
Similarity:153/369 - (41%) Gaps:77/369 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 FSGMIYPKGLSKNSTCLSEYRDHVGSLRYKLP----LRSCNTMPKETDDGGIEFFNTIVLQ---P 145
            ::|.||  ...:.||| |:..::...:....|    ...|.|:.:   ||.:|....:.|.   |
 Worm   407 YTGAIY--AAERFSTC-SQVVENAKQISITFPPPTVSSDCGTVIR---DGKMEALVVVSLDGVLP 465

  Fly   146 HLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQ-QDDDLDEE 209
            | ::.|:..|.|.|.|..                                 |:||. ::..:...
 Worm   466 H-QVTTEWDRFYRVSCDV---------------------------------SMDKMVKEGSVVVT 496

  Fly   210 DVYDANAPTQEEDVTNNEIPMP-GCHMKIYNDEHKIADDVKIGDPLTIVISIDKQKVYGLHVTDC 273
            .:|:|:  :|...|.:...|.| ...::|.|...:......|||||.:||:.::...:.:.||:|
 Worm   497 TIYEAS--SQNTTVLDVATPPPVSAELQILNQLEEPLHKASIGDPLLLVITSEQAGPHNMMVTEC 559

  Fly   274 IVRDGLGWGEQ---RLVGEDGCPMDNEIMG--QFNYTQDRLAANVTFPAHKFPYTTSVYYQCNVR 333
            ......|:|:.   .|: |:|||....::|  :.::.::||.:::.  |.:...:..|...|::.
 Worm   560 TATRVGGFGDTVPFTLI-ENGCPRYPALVGPVEQDFDKNRLKSDLR--AFRLDGSYDVQIVCSIM 621

  Fly   334 LCALEDPTCQEAPQC----------SGKRPKRQAAADSKE-EDGLPATIEVFS-GLYVNENENAN 386
            .||  .|.......|          |..|.||.|..::.| |:.|.|.|.||: |....|.|.||
 Worm   622 FCA--GPNGCPVSNCLDSGTNELFMSHGRKKRSADLEAGETEEKLSAIIRVFAKGEDEEEMEMAN 684

  Fly   387 DSDEDAVYKEKTLDDALCVSQRTF-AIAIAIAGLILMLAVVAAV 429
            ::...::.....|   ||:::..| :..::::.|...|:.:.|:
 Worm   685 NTMMTSMSDSTEL---LCIAEPFFVSSVVSLSVLCFALSAIIAI 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_726461.1 ZP 66..349 CDD:214579 59/284 (21%)
noah-2NP_502699.1 PAN_1 28..112 CDD:459635
PAN_AP_HGF 125..203 CDD:238532
PAN_AP_HGF 217..292 CDD:238532
PAN_1 310..382 CDD:459635
ZP 392..634 CDD:214579 58/273 (21%)
Blue background indicates that the domain is not in the aligned region.

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