DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cut-6

DIOPT Version :10

Sequence 1:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_499400.2 Gene:cut-6 / 176520 WormBaseID:WBGene00000853 Length:572 Species:Caenorhabditis elegans


Alignment Length:308 Identity:72/308 - (23%)
Similarity:106/308 - (34%) Gaps:90/308 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SLRYKLPLRSCNT------MPKETDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMK 171
            |:...:|..:||.      .||     ||....:||...|...:|...:...|:|.|...|    
 Worm   276 SIGLTVPFSACNVHRYRSLNPK-----GIFVEVSIVFMFHSLFMTKTDQTVKVQCFYMEAD---- 331

  Fly   172 PKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMK 236
                  ||...|              |.......:..|.:|.                ||.|...
 Worm   332 ------KHVTVP--------------LSVSMITTVFREQIYQ----------------MPQCAYT 360

  Fly   237 IYNDEHKIADDVKIGDPLTIVISI------------DKQKVYGLHVTDCIVRDGLGWGEQRLVGE 289
            :    .|.|.|..|....|:..|:            ||. .:|:.|..|.|.:|.| ....::..
 Worm   361 L----RKGAPDGPIVRFATLGESVYHRWECIEVEGADKD-TFGMLVHSCYVDNGYG-DRVDILDS 419

  Fly   290 DGCPMDNEIMGQFNY-TQDRLAANVTFPAHKFPYTTS--VYYQCNVRLCALEDPTCQ--EAPQCS 349
            :||.:|..::...:| |..|||   |.|.|.|.|...  :.:||.:.||...|..|:  ..||..
 Worm   420 NGCGLDAVLLSTPDYDTSLRLA---TKPYHVFKYADRPVLQFQCQITLCLKYDGGCEGITPPQNC 481

  Fly   350 GK-----------RPKRQAAADSKEEDGLPATIEVFS-GLYVNENENA 385
            .|           .|:::.....:..||: .||:||: .:.|.|.|.|
 Worm   482 KKLPGEDGHHHHHHPEKRRKLVRRLADGV-GTIDVFTDSVTVLEQEPA 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_726461.1 ZP 66..349 CDD:214579 60/258 (23%)
cut-6NP_499400.2 VWA 47..208 CDD:459670
ZP 233..480 CDD:214579 59/257 (23%)
Blue background indicates that the domain is not in the aligned region.

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