DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pio and dpy-1

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_001370799.1 Gene:dpy-1 / 175342 WormBaseID:WBGene00001063 Length:1427 Species:Caenorhabditis elegans


Alignment Length:456 Identity:95/456 - (20%)
Similarity:157/456 - (34%) Gaps:127/456 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 AAEAEVASTSKP----AVEPS--VRIKCLSGSMLITIKDAPPNHETGLFSGMIYPKGLSKNSTCL 104
            |...||..|::|    ..|.|  :.::|:.....:.:.  ||   .| |.|:...||...::.|.
 Worm  1024 AESPEVLVTTRPENAETAENSGIIDLECVGDGFKVQVN--PP---AG-FRGVAVVKGYQDDARCK 1082

  Fly   105 SEYRDHVGSLRYKLPL------RSCN-TMPKETDDGGIEFFNTIVLQPHL----KLITDLGRGYH 158
            :       :....|||      ..|. |..|.:|..|:.  :::||  ||    :|.|...|.|.
 Worm  1083 A-------TASSSLPLNLFISNNECGVTQVKSSDPNGLN--SSLVL--HLLHDDELNTAEDRAYL 1136

  Fly   159 VRC--AYKSRDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQE- 220
            ::|  ..:::||.:..                                        :.|....| 
 Worm  1137 LQCFIGAQNQDAVVST----------------------------------------NLNVVRSEL 1161

  Fly   221 ---EDVTNNEIPMPGCHMKIYND--EHKIADDVKIGDPL----TIVISIDKQKVYGLHVTDCIVR 276
               |.::.:.:| |.|...|..:  |..|.....:|..:    ....:.|..:.||:.|..|...
 Worm  1162 AIAETISLSTLP-PTCTYSIRKEGPEGPIVSRAVVGQTVWHRWECDGTNDTNQAYGIQVHSCYAS 1225

  Fly   277 DGLGWGEQRLVGED--GCPMDNEIMGQFNYTQDRL---AANVTFPAHKFPYTTSVYYQCNVRLCA 336
            |.:   |::....|  ||..|..::....|..|.|   ||:..|..|.   ..|:.:.|.:.||.
 Worm  1226 DDV---ERKFAFVDPRGCSSDLALLTDLTYADDSLTAWAASHVFNVHD---AESLKFVCKLSLCT 1284

  Fly   337 LEDPTCQ-EAPQCSGKRPKRQAAADSKEEDGLPATIEVF-SGLYVNENENANDSDEDAVYKEKTL 399
            .:...|: ..|...|...|.......:...|:.:..|.. |.|..|....:..||        .|
 Worm  1285 RDGDGCEGVTPPACGNTNKTGLLLTKRLAKGINSVDEALTSALSTNVKLTSGSSD--------GL 1341

  Fly   400 DDALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMARRSTK------------TVSNS---GSSIY 449
            :|.|  ...|.:....:..|:.:.|:||  :.|::|...:            |:|.|   |.||.
 Worm  1342 EDLL--KSATSSYLFWVVALVAVAAIVA--ISILSRNMAENSDTATTCSDPTTMSESQDFGGSIR 1402

  Fly   450 S 450
            |
 Worm  1403 S 1403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 62/311 (20%)
Zona_pellucida <248..349 CDD:278526 25/110 (23%)
dpy-1NP_001370799.1 VWA 823..975 CDD:395045
Zona_pellucida 1050..1299 CDD:421542 62/312 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.