DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cutl-9

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496293.2 Gene:cutl-9 / 174640 WormBaseID:WBGene00010893 Length:562 Species:Caenorhabditis elegans


Alignment Length:504 Identity:104/504 - (20%)
Similarity:181/504 - (35%) Gaps:140/504 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KTGTRMDAFHTALHLITIAALTTHAAQIPTAMKDAQSSLSD-----AIAAAEA------------ 49
            |:||.:.......|...|.:....|.......|:..:|.:|     .|..|.|            
 Worm   140 KSGTDLGTKSKTFHENDINSAPDIAETFLLPRKNETTSDTDEGEWKGIGGASAGGNAIFGGTRGE 204

  Fly    50 EVASTSKPAVEPSVRIKCLSGSML----ITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSE---Y 107
            |:....|.....|.|.:  .||.|    .:..|.||               |:..:.|..|   .
 Worm   205 ELRVFGKSVTSSSTRSR--PGSTLPLSTSSSPDCPP---------------LTTCAPCACEERRT 252

  Fly   108 RDHVGSLRYKLPLRSCNT-MPKETDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMK 171
            |....|:|.::||.|||| ..::.:...:......|:..|...||.|.:.||::|||        
 Worm   253 RRATNSIRLEVPLNSCNTKRDRKLNPPSVVVSLIAVVSFHDSFITKLDKAYHIQCAY-------- 309

  Fly   172 PKKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMK 236
                                    ...:|....|||..       .|.|::: |..:..|.|...
 Worm   310 ------------------------AEAEKTVSTDLDVN-------MTDEQEI-NGTVEPPSCDYL 342

  Fly   237 IYNDEHKIADDVKIGD----------PLTIVISIDKQKVYGLHVTDCIVRDGLGWGEQRLVGEDG 291
            |.:.......:..:|:          .||     :|.|:.   |..|.|:||.| .:..::.:.|
 Worm   343 ISDQNGNSVQNSLVGELVRHQWVCKGGLT-----NKLKML---VHQCYVKDGAG-QQFEVIDQHG 398

  Fly   292 CPMDNEIMGQFNYTQDRLAANVTFPAHKFPYTTSVYYQCNVRLCALEDPTCQE--APQCSG---- 350
            |.:|..::....|::|.::|.|.....|||..::|.::|.:..|:::|..|.:  .|:|..    
 Worm   399 CTLDQLMLQTPTYSEDGMSAQVDAYIFKFPDRSTVDFRCTITFCSVDDAECLDMTPPKCGANNNL 463

  Fly   351 -KRPKRQAAADSKEEDGLPATIEVFSGLYVNE------NENANDSDE---DAVYKEKTLDDALCV 405
             :|.||.:       .||.:     ..|:.|.      :.:..|:::   ......||.::    
 Worm   464 LRRKKRSS-------HGLSS-----MSLHANSLTVFDIDSSKTDTNQLLPTPALLRKTFEE---- 512

  Fly   406 SQRTFAIAIAIAGLILMLAVVAAVLCI-------MARRSTKTVSNSGSS 447
            .:|||.:::|..|:::..:...|.:.|       ..|.:.|...:.|||
 Worm   513 YERTFCVSVASFGILISASTFFATISIAVIFSYFFLRFNHKLSIDDGSS 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 65/302 (22%)
Zona_pellucida <248..349 CDD:278526 27/112 (24%)
cutl-9NP_496293.2 ZP 244..460 CDD:214579 59/264 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I6139
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 0.386 Inparanoid score I3701
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376126at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.070

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