DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pio and cutl-2

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_496097.1 Gene:cutl-2 / 174532 WormBaseID:WBGene00013145 Length:382 Species:Caenorhabditis elegans


Alignment Length:369 Identity:71/369 - (19%)
Similarity:135/369 - (36%) Gaps:96/369 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 EPSVRIKCLSGSMLITIK-DAPPNHETGLFSGMIYPKGLSKNSTCLSEYRDHVG-SLRYKLPLRS 122
            ||  :|:|....:.|.:: |:|       |.|.::.:|.:...:|.:.:..... ::.::.....
 Worm    24 EP--KIRCAPTGITIMLETDSP-------FKGALFLRGSADKKSCKANFSAQPSQNISFEFGFDD 79

  Fly   123 CNTMPKE--TDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKPQA 185
            |.:..|.  ....|:...:.:|:..|..:||.....|.:.|.|:..::.:               
 Worm    80 CPSRRKRQIVAPRGMTMSSVLVVSYHGSIITHRDVAYQIDCFYREENSRV--------------- 129

  Fly   186 FRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHK-IADDV- 248
                                   |.:...|||  :..:.::|..:|.|..::.....| :|..: 
 Worm   130 -----------------------ETMLSVNAP--QPRILSDEPKLPTCDYRVEVTGGKAVAGGIV 169

  Fly   249 ------------KIGDPLTIVISID---KQKVYGLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEI 298
                        .:||.:..:.:..   ...||.:.|..|...|| |....::|.|:||..|.|:
 Worm   170 TSSLSETASQIANVGDSVIHIWTCSGDAPSDVYCIQVYSCTAEDG-GSDTVQVVDENGCTTDGEL 233

  Fly   299 MGQFNYTQDRLAANVTFPAHKFPYTTSVYYQCNVRLCALEDPTCQEAP--QCSGKRPKRQAAADS 361
            :....|.:..:.|..:..|.||.....||::||:|: .:::|: .|.|  .||   |.......|
 Worm   234 LSPIKYKEGSMRAAASSHAFKFVDNHIVYFKCNIRI-TVKNPS-GECPVNNCS---PNGSTGLIS 293

  Fly   362 K-------------EEDGLPA-----TIEVFSGLYVNENENAND 387
            :             ::..||.     .|.|.||..:.|.|.|.:
 Worm   294 RKARDVFEHPFLLLKQKVLPVFNKEINILVTSGELIIEEEQAKN 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 55/305 (18%)
Zona_pellucida <248..349 CDD:278526 28/118 (24%)
cutl-2NP_496097.1 ZP 28..286 CDD:214579 57/310 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376126at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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