DRSC/TRiP Functional Genomics Resources

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Protein Alignment pio and cut-3

DIOPT Version :9

Sequence 1:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_495780.1 Gene:cut-3 / 174347 WormBaseID:WBGene00009041 Length:389 Species:Caenorhabditis elegans


Alignment Length:435 Identity:96/435 - (22%)
Similarity:154/435 - (35%) Gaps:126/435 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VASTSKPAVEPSV----RIKCLSGSMLITIKDAPPNHET-GLFSGMIYPKGLSKNSTCLSEY--R 108
            |||.|...|:.:|    .::|  |...||:     |..| ..|.|.:|.|||.....|.::.  |
 Worm    14 VASVSAIPVDNNVEGEPEVEC--GPTSITV-----NFNTRNAFEGHVYVKGLFDQQECRNDEGGR 71

  Fly   109 DHVGSLRYKLPLRSCN-TMPKETDDGGIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKP 172
            ...|   .:||..:|| ...:..:..|:....|:|:..|.:.:|.:.|.|.|:|.|...|..:. 
 Worm    72 QVAG---IELPFDTCNVARTRSLNPKGVFVTTTVVVSFHPQFVTKVDRAYRVQCFYMEADKTVS- 132

  Fly   173 KKYLRKHAQKPQAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKI 237
                                              .:.:|.|.....|.:     .:|||.|..:|
 Worm   133 ----------------------------------TQIEVSDLTTAFQTQ-----VVPMPICKYEI 158

  Fly   238 YNDEHKIADDVKIGDPLTIVISIDKQKVYGLHVTD-------------CIVRDGLGWGEQRLVGE 289
            .|..       ..|:|  :..:...|:||.....|             |.|.||.| ...:::.|
 Worm   159 LNGG-------PTGEP--VQFATIGQQVYHKWTCDSETVDTFCAVVHSCTVDDGNG-DTVQILDE 213

  Fly   290 DGCPMDNEIMGQFNYTQDRLAANVTFPAHKFPYT--TSVYYQCNVRLCALED------PTCQEAP 346
            :||.:|..::....|..|.:|..   .||.:.|.  :.::|||.:.:...|.      |||.| |
 Worm   214 NGCALDKFLLNNLEYPTDLMAGQ---EAHVYKYADRSQLFYQCQISITVKEPNEECARPTCSE-P 274

  Fly   347 QCSG----------------KR--PKRQAAADSKEEDGLPATIEVFSGLYVNENENA------ND 387
            |..|                ||  |..:...|.:.|   ..|:||..|...:....|      .:
 Worm   275 QGFGAVKQANQTAQFFRVLKKRSAPVMENILDVRAE---LTTLEVLEGNLPSSLTQAQALVASRE 336

  Fly   388 SDEDAVYKEKTLDDALCVSQRTFAIAIAIAGLILMLAVVAAVLCI 432
            ..||:..:|      ||:|....::.....||.:.:|:....:.:
 Worm   337 IGEDSFRQE------LCISSFHISVVTVFLGLTVFVAIFITYMIV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_001163295.1 ZP 66..349 CDD:214579 70/307 (23%)
Zona_pellucida <248..349 CDD:278526 31/121 (26%)
cut-3NP_495780.1 ZP 33..272 CDD:214579 66/301 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D376126at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22907
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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