DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pio and cutl-13

DIOPT Version :10

Sequence 1:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster
Sequence 2:NP_490736.2 Gene:cutl-13 / 171637 WormBaseID:WBGene00021025 Length:445 Species:Caenorhabditis elegans


Alignment Length:454 Identity:87/454 - (19%)
Similarity:143/454 - (31%) Gaps:128/454 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 EPSVRIKCLSGSMLITIKDAPPNHETGLFSGMIYPKGLSKNSTCLSEY--RDHVGSLRYKLPLRS 122
            ||  :::|...|:..:.....|      |.|.:|.:|..:...|..::  .:..|. .:.:.|..
 Worm    26 EP--KLQCNPESITFSFNTRNP------FIGNVYIRGFYRTPGCRRQFLAPNQAGG-SFTVRLGD 81

  Fly   123 CNTMPKETDDG----GIEFFNTIVLQPHLKLITDLGRGYHVRCAYKSRDAAMKPKKYLRKHAQKP 183
            |.........|    |:....|.|...|..|.|...|.:::||.|...::.:|.           
 Worm    82 CGMRRSRQISGHSPRGVNQHITFVANFHPNLATKEERSFNIRCFYAHSESVVKA----------- 135

  Fly   184 QAFRSDDRREYGRSLDKQQDDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYND--EHKIAD 246
                                 |||...:       .||........:|.|...:...  |.....
 Worm   136 ---------------------DLDVSSM-------PEESFEQGVTIVPQCTYSLREGTFEGPKVS 172

  Fly   247 DVKIGDPLTIV--ISIDKQKVYGLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFNYTQDRL 309
            :.::|  :|||  ...|....||:.:..|.:.|..|.....|:.|:||.:..: ..|..|.....
 Worm   173 NTRVG--MTIVHRWDCDTSGNYGILLRGCTILDSRGVESFPLLDENGCSVSRD-FPQVVYLPSLT 234

  Fly   310 AANVTFPAHKFPYTTSVYYQCNVRLC--------ALEDPTCQEAPQ--CSGKRPKRQAAADSKEE 364
            :|.:...|..||...|:.:.|.::||        .:..|.|....|  .:|:.|...........
 Worm   235 SAYMAIEAISFPDQPSISFSCQIKLCDKGSDECRGMSPPACTPLTQVPITGQVPMPFDNTIGNTF 299

  Fly   365 DGLP---------------ATI----EVFSGLYVNENENA------------------NDSDEDA 392
            ||:|               |.|    |....|...|.:..                  |.:.|| 
 Worm   300 DGIPLEPWMKEPSPPTDDVANITSEGEPMPRLITEEEQYQIESNHVEAREKRFAHRLFNITSED- 363

  Fly   393 VYKEKTLD-----------------DALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMARRSTK 439
            :|.|.|::                 ...|||..||.|: |:| ::.:..|...::|.......|
 Worm   364 LYVEPTVEPMEVEMPGAPRETARRVSEPCVSVETFYIS-ALA-VLFVFVVSIGMVCFFGSHMLK 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pioNP_726461.1 ZP 66..349 CDD:214579 58/302 (19%)
cutl-13NP_490736.2 ZP 30..278 CDD:214579 57/296 (19%)

Return to query results.
Submit another query.