DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4681 and Tex9

DIOPT Version :10

Sequence 1:NP_611937.2 Gene:CG4681 / 37928 FlyBaseID:FBgn0069913 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_038938433.1 Gene:Tex9 / 300822 RGDID:1304772 Length:431 Species:Rattus norvegicus


Alignment Length:407 Identity:97/407 - (23%)
Similarity:180/407 - (44%) Gaps:69/407 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ELLSREKELFKINQELNLLTLSPAADAMYPAKGSSKSTAVAVPRFATFQKQK---GPSSLLRKKG 64
            :||:||:|..::|.||...|.:....|....:...:..|.......|..|::   ||..||..:|
  Rat    70 DLLAREQEYKRLNAELEAKTANLVRQAEEVIREQQEERARPFSALTTSCKEEDGYGPRDLLSSEG 134

  Fly    65 APTACTKAAPKASPGRETVPTARSPMPDMSLLTKSKPAAGPTSPTPRNLSKFSTFTKDVSSKTAT 129
                      .|.|..||.|..::              .||.:.....|     .:.|...|..:
  Rat   135 ----------MAHPWSETKPKTKN--------------TGPVNKIQNRL-----HSADKERKINS 170

  Fly   130 YVKYRNPNFSESPSLDELLRNDADEANRKPDVVEVEVTQKRESTTVVNGQLKKQV-----TKDNF 189
            .||.:.|:...:.  |..:.:|..:.:....:..:|            |||::.|     ..|:|
  Rat   171 SVKLKYPDVQTAN--DVAIPDDFSDFSLAKTISRIE------------GQLEEDVLPECADDDSF 221

  Fly   190 ------------IKFLKAKVAILEEDHAQHAGELIRQKEQLEHALEAQRKSEHQRDQAINSNKHL 242
                        |:|||||:.:::|:......|..:::::::   :.:.|.::..:..:...:.:
  Rat   222 CGVSKDIGTEAQIRFLKAKLHVMQEELDSVVCECNKKEDEIQ---DLKSKVKNLEEDCVRQQRTV 283

  Fly   243 SEQLMRSERQ---CEGFNQRQKEQQLEFITQQRELEVLKRDAKVSRQTNINLENRLSRVQEDADA 304
            :.|..:.|:.   .|..|:|..|.|.:..:..||||..:|..|.:..:....|.||:|..|:|:.
  Rat   284 TSQQTQIEKYRNLFEEANKRCDELQQQLSSVDRELENKRRLQKQAATSQSATEVRLNRALEEAEK 348

  Fly   305 ARQELKLLREEQRDQLEAHRKELKLRDSRIRALKRQRGDLLNAYKKQLYMIDNLKRQTICLEQSA 369
            .:.||..||:..:|......:::::..|..:.|:||:|:|:..:||||.:||.||||.:.:|.:.
  Rat   349 YKAELSKLRQTNKDITNEDHQKIEVLKSENKKLERQKGELMIGFKKQLKLIDILKRQKMHIEAAK 413

  Fly   370 AIGFGEKEFNKVLDWNA 386
            .:.|.|:||.|.|:|.:
  Rat   414 MLSFSEEEFMKALEWGS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4681NP_611937.2 Smc <190..>351 CDD:440809 40/163 (25%)
Tex9XP_038938433.1 SMC_prok_B <231..>406 CDD:274008 48/177 (27%)

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