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Protein Alignment Start1 and stard4
DIOPT Version :9
Sequence 1: | NP_001246495.1 |
Gene: | Start1 / 37927 |
FlyBaseID: | FBgn0035028 |
Length: | 583 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005170291.1 |
Gene: | stard4 / 550374 |
ZFINID: | ZDB-GENE-050417-168 |
Length: | 221 |
Species: | Danio rerio |
Alignment Length: | 125 |
Identity: | 28/125 - (22%) |
Similarity: | 45/125 - (36%) |
Gaps: | 49/125 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 490 WVTSAVSVQYAAVPPS----PKY-TRGQ--NIVSGFAFREIVGKSD------SCIVE-------- 533
|.:...|::....|.. .|| |.|| ||:|...|.:....|: ||.|.
Zfish 94 WDSMMTSMEILETPEQGCCVVKYTTSGQLWNIISPREFVDFSYTSECERGLLSCGVSVDREQHSS 158
Fly 534 -----------WVLCL----------------DLKGYIPRYVLDAALTSSMTDYISNLRK 566
| .|: ||:|::||..:|.|:.|.:..:.|:|::
Zfish 159 GCVRGFNHACGW-FCVPTDDPSLSLLTGYIQTDLRGHLPRAAVDTAMASGLITFFSDLQR 217
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Start1 | NP_001246495.1 |
MENTAL |
57..232 |
CDD:287435 |
|
SRPBCC |
247..571 |
CDD:301327 |
28/125 (22%) |
stard4 | XP_005170291.1 |
SRPBCC |
29..219 |
CDD:301327 |
28/125 (22%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170574799 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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