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Protein Alignment Start1 and Stard4
DIOPT Version :9
Sequence 1: | NP_001246495.1 |
Gene: | Start1 / 37927 |
FlyBaseID: | FBgn0035028 |
Length: | 583 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001099629.1 |
Gene: | Stard4 / 291699 |
RGDID: | 1309475 |
Length: | 224 |
Species: | Rattus norvegicus |
Alignment Length: | 76 |
Identity: | 20/76 - (26%) |
Similarity: | 42/76 - (55%) |
Gaps: | 2/76 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 491 VTSAVSVQYAAVPPSPKYTRGQNIVSGFAFREIVGKSDSCIVEWVLCLDLKGYIPRYVLDAALTS 555
::..|||:::.. .|::.||.|...|:....:....:..::...:..||:|.||:..:|.|:.|
Rat 146 LSCGVSVEWSET--RPEFVRGYNHPCGWFCVPLKDSPNQSLLTGYIQTDLRGMIPQSAVDTAMAS 208
Fly 556 SMTDYISNLRK 566
::.::.|:|||
Rat 209 TLANFYSDLRK 219
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Start1 | NP_001246495.1 |
MENTAL |
57..232 |
CDD:287435 |
|
SRPBCC |
247..571 |
CDD:301327 |
20/76 (26%) |
Stard4 | NP_001099629.1 |
SRPBCC |
21..222 |
CDD:301327 |
20/76 (26%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166335622 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3845 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.740 |
|
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