DRSC/TRiP Functional Genomics Resources

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Protein Alignment Start1 and STARD3

DIOPT Version :9

Sequence 1:NP_001246495.1 Gene:Start1 / 37927 FlyBaseID:FBgn0035028 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001159409.1 Gene:STARD3 / 10948 HGNCID:17579 Length:445 Species:Homo sapiens


Alignment Length:546 Identity:128/546 - (23%)
Similarity:210/546 - (38%) Gaps:180/546 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 MSVVRRFFCLFVTFDLVFVSLLWLICIVINGDNIFTAFHKQIVEYTIYKSLFDVVAVAICRFLVL 120
            :|.|||.|||||||||:|:||||:|.:..| ..|.....::|::|....|.||:..:|..||..|
Human    46 ISDVRRTFCLFVTFDLLFISLLWIIELNTN-TGIRKNLEQEIIQYNFKTSFFDIFVLAFFRFSGL 109

  Fly   121 IFFYAILYINHW--------SIIALSTSGSCLFLISKVFVFDWLDSKQQVFEVILIITSFILAWG 177
            :..||:|.:.||        |.::.|:|.||             .:|..    :...:...|...
Human   110 LLGYAVLRLRHWSRRWCPVHSSLSRSSSLSC-------------SAKGH----LATCSPSSLLSS 157

  Fly   178 EAWFLDCRVIPQERHAQHYFRTMTSNDRTPMEQPAILIEQERPP------QSVTDFYSLMDTARH 236
            ..|      .|....::.|.|.:..:|..|....|..:...|.|      .|...|||..::...
Human   158 PGW------RPGSLTSKSYPRKLKRSDSAPPGYLAAQVAVARGPLLFSGALSEGQFYSPPESFAG 216

  Fly   237 SDEEDE-----------LDDEYTQMGLDCLRKAYEII-ESSDWKVEKVNQKGDTIHSTQRDKIGK 289
            ||.|.:           .:.||.:.|.:......:|: :..:||.||.|:.|||:::.:....||
Human   217 SDNESDEEVAGKKSFSAQEREYIRQGKEATAVVDQILAQEENWKFEKNNEYGDTVYTIEVPFHGK 281

  Fly   290 IYKLTARIKYPAKALMEDLFYRIEDCPKWNPALLESKIVRKINSYTDITYQVSVGGGGGMVKSRD 354
            .:.|...:..||:.:.:::..:.|....||..:...:|::::...|.|:|.||.|..||:|..||
Human   282 TFILKTFLPCPAELVYQEVILQPERMVLWNKTVTACQILQRVEDNTLISYDVSAGAAGGVVSPRD 346

  Fly   355 FVNLRSCRLFYNGQICDDDETAQLSSDDGNSSLNRSCEGSVSTISDGDSNTPLLPSSVSSCKATF 419
            |||:|                                                            
Human   347 FVNVR------------------------------------------------------------ 351

  Fly   420 PTSSKGAAMPFDTLGNSLGAKSLGPIVNFDEEPPPLDQDEFEDAKDKVDGEANNMTKPNVPSVGK 484
                                                                         .:.:
Human   352 -------------------------------------------------------------RIER 355

  Fly   485 TKDRVWVTSAVSVQYAAVPPSPKYTRGQNIVSGFAFREIVGKSDS----CIVEWVLCLDLKGYIP 545
            .:|| :::|.::..::|.||:.||.||:|...||    ||.||.|    |...|:|..||||.:|
Human   356 RRDR-YLSSGIATSHSAKPPTHKYVRGENGPGGF----IVLKSASNPRVCTFVWILNTDLKGRLP 415

  Fly   546 RYVLDAALTSSMTDYISNLRKHVNEL 571
            ||::..:|.::|.::..:||:.::||
Human   416 RYLIHQSLAATMFEFAFHLRQRISEL 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Start1NP_001246495.1 MENTAL 57..232 CDD:287435 55/188 (29%)
SRPBCC 247..571 CDD:301327 67/328 (20%)
STARD3NP_001159409.1 MENTAL 47..212 CDD:287435 55/188 (29%)
START_STARD3-like 233..441 CDD:176915 68/333 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141902
Domainoid 1 1.000 124 1.000 Domainoid score I5530
eggNOG 1 0.900 - - E1_KOG3845
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38227
Inparanoid 1 1.050 176 1.000 Inparanoid score I4052
Isobase 1 0.950 - 0 Normalized mean entropy S6681
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1437203at2759
OrthoFinder 1 1.000 - - FOG0001150
OrthoInspector 1 1.000 - - otm40906
orthoMCL 1 0.900 - - OOG6_106748
Panther 1 1.100 - - LDO PTHR46121
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4583
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.710

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