DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Start1 and star2

DIOPT Version :10

Sequence 1:NP_611936.2 Gene:Start1 / 37927 FlyBaseID:FBgn0035028 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_073775067.1 Gene:star2 / 100331467 ZFINID:ZDB-GENE-200421-1 Length:273 Species:Danio rerio


Alignment Length:392 Identity:74/392 - (18%)
Similarity:137/392 - (34%) Gaps:155/392 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 YFRTMTSNDRTPMEQPAILIEQERPPQSVTDF---YSLMDTARHSDEEDELDDEYTQMGLDCLRK 257
            :.|:|....|..:   |:..::.|..|:...|   .|:..|.|.:...||.|..|.:.|...|.:
Zfish    16 HVRSMAGLQRAAL---AVFGQEFRLLQNRFSFPARSSIRHTHRSAALADEDDVFYQKQGEAALNE 77

  Fly   258 AYEIIESSD-WKVEKVNQKGDTIHSTQRDKIGKIYKLTARIKYPAKALMEDLFYRIEDCPKWNPA 321
            |.:|:|:.| |.:|...:.||.|:|.......|:::|.|.:...|..|.:.||:|:|:..:|||:
Zfish    78 ALQIVENRDGWTLETAEKNGDVIYSKVLTGNRKVFRLEADLDATADELHDILFFRVEEMHEWNPS 142

  Fly   322 LLESKIVRKINSYTDITYQVSVGGGGGMVKSRDFVNLRSCRLFYNGQICDDDETAQLSSDDGNSS 386
            :....:::.:...|.:|::||....|.::..|||:::|                        :||
Zfish   143 IRRITVLKHVGGNTLVTHEVSAETAGNLIGQRDFLSVR------------------------HSS 183

  Fly   387 LNRSCEGSVSTISDGDSNTPLLPSSVSSCKATFPTSSKGAAMPFDTLGNSLGAKSLGPIVNFDEE 451
            .:.||                             ....|||..|::|                  
Zfish   184 KSESC-----------------------------VYLGGAATRFESL------------------ 201

  Fly   452 PPPLDQDEFEDAKDKVDGEANNMTKPNVPSVGKTKDRVWVTSAVSVQYAAVPPSPKYTRGQNIVS 516
                                                               ||.|.:.|.::   
Zfish   202 ---------------------------------------------------PPQPGFVRAED--- 212

  Fly   517 GFAFREIVGKSDSCIV-------------EWVLCLDLKGYIPRYVLDAALTSSMTDYISNLRKHV 568
                      ..:||:             .|:|.:|:||::|:.:::.||..:..|:..:||:.:
Zfish   213 ----------GPTCIILQPLQDAPHRSRFTWLLNMDVKGWLPQSLVNKALPRAQVDFTKHLRRRL 267

  Fly   569 NE 570
            .|
Zfish   268 AE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Start1NP_611936.2 MENTAL 57..233 CDD:463097 8/39 (21%)
SRPBCC 247..571 CDD:472699 61/338 (18%)
star2XP_073775067.1 None

Return to query results.
Submit another query.