DRSC/TRiP Functional Genomics Resources

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Protein Alignment Start1 and star2

DIOPT Version :9

Sequence 1:NP_001246495.1 Gene:Start1 / 37927 FlyBaseID:FBgn0035028 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_021335868.1 Gene:star2 / 100331467 ZFINID:ZDB-GENE-200421-1 Length:287 Species:Danio rerio


Alignment Length:356 Identity:67/356 - (18%)
Similarity:124/356 - (34%) Gaps:152/356 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SLMDTARHSDEEDELDDEYTQMGLDCLRKAYEIIESSD-WKVEKVNQKGDTIHSTQRDKIGKIYK 292
            ||..:|..:||:|..   |.:.|...|.:|.:|:|:.| |.:|...:.||.|:|.......|:::
Zfish    66 SLKRSAALADEDDVF---YQKQGEAALNEALQIVENRDGWTLETAEKNGDVIYSKVLTGNRKVFR 127

  Fly   293 LTARIKYPAKALMEDLFYRIEDCPKWNPALLESKIVRKINSYTDITYQVSVGGGGGMVKSRDFVN 357
            |.|.:...|..|.:.||:|:|:..:|||::....:::.:...|.:|::||....|.::..|||::
Zfish   128 LEADLDATADELHDILFFRVEEMHEWNPSIRRITVLKHVGGNTLVTHEVSAETAGNLIGQRDFLS 192

  Fly   358 LRSCRLFYNGQICDDDETAQLSSDDGNSSLNRSCEGSVSTISDGDSNTPLLPSSVSSCKATFPTS 422
            :|                        :||.:.||                             ..
Zfish   193 VR------------------------HSSKSESC-----------------------------VY 204

  Fly   423 SKGAAMPFDTLGNSLGAKSLGPIVNFDEEPPPLDQDEFEDAKDKVDGEANNMTKPNVPSVGKTKD 487
            ..|||..|::|                                                      
Zfish   205 LGGAATRFESL------------------------------------------------------ 215

  Fly   488 RVWVTSAVSVQYAAVPPSPKYTRGQNIVSGFAFREIVGKSDSCIV-------------EWVLCLD 539
                           ||.|.:.|.::             ..:||:             .|:|.:|
Zfish   216 ---------------PPQPGFVRAED-------------GPTCIILQPLQDAPHRSRFTWLLNMD 252

  Fly   540 LKGYIPRYVLDAALTSSMTDYISNLRKHVNE 570
            :||::|:.:::.||..:..|:..:||:.:.|
Zfish   253 VKGWLPQSLVNKALPRAQVDFTKHLRRRLAE 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Start1NP_001246495.1 MENTAL 57..232 CDD:287435 2/2 (100%)
SRPBCC 247..571 CDD:301327 61/338 (18%)
star2XP_021335868.1 SRPBCC 76..284 CDD:326336 63/346 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574803
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3845
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D581052at33208
OrthoFinder 1 1.000 - - FOG0001150
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.710

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