DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and AT1G01940

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_171696.2 Gene:AT1G01940 / 839309 AraportID:AT1G01940 Length:160 Species:Arabidopsis thaliana


Alignment Length:154 Identity:80/154 - (51%)
Similarity:100/154 - (64%) Gaps:3/154 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 NVVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSI 547
            :|.|||..|||...:|..||||:.|||.....:|||:|.||||.|||||:|.|||.|||.||.||
plant     2 SVTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTGKGGTSI 66

  Fly   548 WGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLNI 612
            ||..|.||...||||:....:||||:||||||||||||....|.|:..:|:||:|..|.| ||:|
plant    67 WGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFE-VLDI 130

  Fly   613 CNSKANPKTDKPYDDIKI--ISIH 634
            .........|:|..:|::  ::||
plant   131 MEKTQTGPGDRPLAEIRLNRVTIH 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 77/149 (52%)
AT1G01940NP_171696.2 Cyclophilin_PPIL3_like 1..153 CDD:238909 78/151 (52%)
Blue background indicates that the domain is not in the aligned region.

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