DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and ROC4

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001154684.1 Gene:ROC4 / 825376 AraportID:AT3G62030 Length:313 Species:Arabidopsis thaliana


Alignment Length:172 Identity:83/172 - (48%)
Similarity:107/172 - (62%) Gaps:7/172 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 SKEDIIAVPEASVVQRIYENVVL-HTTKGDIHMRLFFKEVPKTVENF---CVHAKNGYYNGHIFH 524
            ::|:.:..|:|.|..::|.:|.: ....|.|.|.||.:.||||||||   |...|...|.|..||
plant   134 AEEEEVIEPQAKVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFH 198

  Fly   525 RVIKGFMVQTGDPT-GTGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLP 588
            |:||.||:|.||.| |.||||.||:|:.|:||.. :|||..|..:||||||||||||||||..:.
plant   199 RIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENF-TLKHTGPGILSMANAGPNTNGSQFFICTVK 262

  Fly   589 TPWLDNKHTVFGRVYRGMEVVLNICNSKANPKTDKPYDDIKI 630
            |.||||||.|||:|..||::|..: .|:.....|.|....:|
plant   263 TSWLDNKHVVFGQVIEGMKLVRTL-ESQETRAFDVPKKGCRI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 77/151 (51%)
ROC4NP_001154684.1 cyclophilin_ABH_like 149..307 CDD:238907 79/157 (50%)
Blue background indicates that the domain is not in the aligned region.

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