DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3511 and AT2G36130

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_181157.1 Gene:AT2G36130 / 818186 AraportID:AT2G36130 Length:164 Species:Arabidopsis thaliana


Alignment Length:162 Identity:81/162 - (50%)
Similarity:107/162 - (66%) Gaps:6/162 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   470 AVPEASVVQRIYENVVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQT 534
            |.||.|..:     |.|.|:.|...:.:::|..|:|..||...::.|||:..:|||::|.|:||.
plant     3 ARPEGSPPE-----VTLETSMGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFIVQG 62

  Fly   535 GDPTGTGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVF 599
            |||||||.||:||:||.|:||....|||.....:|||||||||||||||||:.|.|.||.|||:|
plant    63 GDPTGTGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIF 127

  Fly   600 GRVYRGMEVVLNICNSKANPKTDKPYDDIKII 631
            |||.|||||:..: .|.....||:|..::||:
plant   128 GRVCRGMEVIKRL-GSVQTDNTDRPIHEVKIL 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201
WD40 <79..300 CDD:295369
WD40 repeat 85..122 CDD:293791
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 76/147 (52%)
AT2G36130NP_181157.1 cyclophilin 13..159 CDD:412213 76/147 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392223at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.