DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and ppil2

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001039036.2 Gene:ppil2 / 733789 XenbaseID:XB-GENE-855860 Length:521 Species:Xenopus tropicalis


Alignment Length:439 Identity:122/439 - (27%)
Similarity:186/439 - (42%) Gaps:102/439 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 RLVNFD-SKLDTSLFEFAKQKTQVTGLAATPDGKRFAAISTDRKVRVFQFN--TGKLIRVFDEAL 314
            |.::|| ..|....||:.         ..||||..|..:|....::.:..|  ||:.:.......
 Frog    35 RRLSFDHCSLSLQPFEYP---------VCTPDGIVFDLLSIIPWIKKYGTNPITGEKLEAKSLIK 90

  Fly   315 STYTQMQQTKHALPNMEFGRRMAAERDLEKTAQNATLNILFDSTGNFLLYPTMLGIKVINV---- 375
            ..:.:.|..|:..|            .|.....|.:..:..:.|||...|.   .::.:|:    
 Frog    91 LNFAKNQDGKYHCP------------VLFSVFTNNSHIVAVNKTGNVFSYE---AVEQLNIKSKS 140

  Fly   376 ---------VTNRCVTILGKTDNIRPLQVALFQGRIKRQKAAITMEQEASENPALQNILNDPTAF 431
                     .|.:.:..|...:.:....|:.|.......|.....|::|.::|:           
 Frog   141 YKDLLTDEPFTRQDIITLQDPNQLDKFNVSNFHHVKNNLKVTDPDEEKARQDPS----------- 194

  Fly   432 CTAYKKSRFYLYSRRLPS--DLQDVDRDIFNEK--------PSKE-------------------- 466
                    :||.:..:.:  .|.::.||...::        |.|:                    
 Frog   195 --------YYLKNANMETRETLSELYRDFKGDEMLAATMKGPEKKTTDKLNAAHYSTGAVSASFT 251

  Fly   467 ----------DIIAVPEASVVQRIYEN---VVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYY 518
                      :..|:.|.:|..:..:.   |.|||.|||:::.|:..:.|||.|||....|..||
 Frog   252 STAMTPETTHEAAAIAEDTVRYQYVKKKGYVRLHTNKGDLNLELYCDKTPKTCENFVKLCKKNYY 316

  Fly   519 NGHIFHRVIKGFMVQTGDPTGTGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFF 583
            :|.||||.|:.|::|.||||||||||:|.||..||||..|:|.|.....:||||.|||||.||||
 Frog   317 DGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKDELKPNLSHTGRGVLSMANTGPNTNKSQFF 381

  Fly   584 ITVLPTPWLDNKHTVFGRVYRGMEVVLNICNSKANPKTDKPYDDIKIIS 632
            ||.....:||.||||||||..|.:.:..:.|...:.|||:|.::|:|.|
 Frog   382 ITFRSCTYLDRKHTVFGRVVGGFDTLTAMENVDTDTKTDRPKEEIRIES 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201 15/61 (25%)
WD40 <79..300 CDD:295369 12/47 (26%)
WD40 repeat 85..122 CDD:293791
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791 5/15 (33%)
WD40 repeat 275..311 CDD:293791 9/37 (24%)
cyclophilin_WD40 485..633 CDD:238908 78/148 (53%)
ppil2NP_001039036.2 RING-Ubox_PPIL2 39..110 CDD:319577 18/91 (20%)
U-box domain, a modified RING finger 42..79 CDD:319577 10/45 (22%)
RING_Ubox 100..159 CDD:388418 10/73 (14%)
cyclophilin_RING 281..440 CDD:238904 79/150 (53%)
Selenoprotein_S <439..>506 CDD:369143
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392223at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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