DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and Ppib

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_071981.1 Gene:Ppib / 64367 RGDID:620312 Length:208 Species:Rattus norvegicus


Alignment Length:146 Identity:80/146 - (54%)
Similarity:94/146 - (64%) Gaps:8/146 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 GDIHMRLFFKEVPKTVENFCVHAKN----GYYNGHIFHRVIKGFMVQTGDPT-GTGTGGKSIWGS 550
            |.:...||.|.|||||:||...|..    ||.|.. ||||||.||:|.||.| |.|||||||:|.
  Rat    50 GRVTFGLFGKTVPKTVDNFVALATGEKGFGYKNSK-FHRVIKDFMIQGGDFTRGDGTGGKSIYGE 113

  Fly   551 DFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLNICNS 615
            .|.||.. .|||..|..|||||||.:|||||||||.:.|.|||.||.|||:|..||:||..:.|:
  Rat   114 RFPDENF-KLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENT 177

  Fly   616 KANPKTDKPYDDIKII 631
            |.:.: |||..|:.|:
  Rat   178 KTDSR-DKPLKDVIIV 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 80/146 (55%)
PpibNP_071981.1 cyclophilin_ABH_like 37..195 CDD:238907 80/146 (55%)
Blue background indicates that the domain is not in the aligned region.

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