DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and ppil4

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001121802.1 Gene:ppil4 / 554886 ZFINID:ZDB-GENE-030131-6251 Length:454 Species:Danio rerio


Alignment Length:155 Identity:67/155 - (43%)
Similarity:89/155 - (57%) Gaps:9/155 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 VVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSI- 547
            |:|.||.|||.:.|:.:|.||...||....|..|||..:.|.|.:.|::|||||||||.||:|: 
Zfish     3 VLLETTLGDIVIDLYTEERPKASLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESVF 67

  Fly   548 ---WGSD---FKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITV-LPTPWLDNKHTVFGRVYRG 605
               :|..   |:.|.:|.:||.:..||||.|.|.:.:||||.||. ....:||..|||||.|..|
Zfish    68 CKLYGDQARFFESEKMPRIKHRKKGTVSMVNNGSDQHGSQFLITTGENVDYLDGVHTVFGEVTEG 132

  Fly   606 MEVVLNICNSKANPKTDKPYDDIKI 630
            |:|:..| |.........|:.||:|
Zfish   133 MDVLAKI-NETFVDNDFIPFQDIRI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 66/154 (43%)
ppil4NP_001121802.1 cyclophilin_RRM 4..169 CDD:238902 66/154 (43%)
RRM_PPIL4 237..319 CDD:409681
SF-CC1 375..>454 CDD:273721
Blue background indicates that the domain is not in the aligned region.

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