DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3511 and PPIL3

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_115861.1 Gene:PPIL3 / 53938 HGNCID:9262 Length:165 Species:Homo sapiens


Alignment Length:174 Identity:71/174 - (40%)
Similarity:88/174 - (50%) Gaps:38/174 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 NVVLHTTKGDIHMRLFFKEVPKT--VENFCVHAKNGYYNGHIFHRVIKGFMVQTGD-------PT 538
            :|.|||..|||.:.:|.:..|||  :|:.||....                ||..|       |.
Human     2 SVTLHTDVGDIKIEVFCERTPKTCEMESRCVPQAG----------------VQWRDLGSLQPPPP 50

  Fly   539 G-----------TGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWL 592
            |           ||.||.||||..|:||:...|||:....|||||.||||||||||||....|.|
Human    51 GFKQVFCLSLPRTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHL 115

  Fly   593 DNKHTVFGRVYRGMEVVLNICNSKANPKTDKPYDD--IKIISIH 634
            |.|:||||:|..|:|.:..:.....|.||.:|.:|  ||.|:||
Human   116 DMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201
WD40 <79..300 CDD:295369
WD40 repeat 85..122 CDD:293791
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 68/169 (40%)
PPIL3NP_115861.1 cyclophilin 1..158 CDD:294131 69/171 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1392223at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.