DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and CG5808

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster


Alignment Length:158 Identity:64/158 - (40%)
Similarity:88/158 - (55%) Gaps:13/158 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   483 NVVLHTTKGDIHMRLFFKEVPKTVENFCVHAKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSI 547
            :||:.||.||:.:.||..|.|....||....:..|||.::||.|.:||:.|||||:|.|.||.||
  Fly     2 SVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSI 66

  Fly   548 WG-------SDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITV---LPTPWLDNKHTVFGRV 602
            ||       ..|:.||:|.:.|.....:|:.:||.|..|||||:|:   |.:  ||..|.|.|.|
  Fly    67 WGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS--LDGNHCVIGEV 129

  Fly   603 YRGMEVVLNICNSKANPKTDKPYDDIKI 630
            ..|.||:..: |......:.:||.||:|
  Fly   130 VEGHEVLRKL-NDAIVDDSFRPYQDIRI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201
WD40 <79..300 CDD:295369
WD40 repeat 85..122 CDD:293791
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 63/156 (40%)
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 63/156 (40%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447236
Domainoid 1 1.000 81 1.000 Domainoid score I449
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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