DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and CG2852

DIOPT Version :9

Sequence 1:NP_001286847.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster


Alignment Length:171 Identity:80/171 - (46%)
Similarity:99/171 - (57%) Gaps:11/171 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   469 IAVPEASVVQRIYENVVLHTT-----KGDIHMRLFFKEVPKTVENF---CVHAKNGYYNGHIFHR 525
            :.|.:.|...::.|.|....|     .|.|.:.||.|.||||||||   .:..:...|.|..|||
  Fly    16 VVVADDSKGPKVTEKVFFDITIGGEPAGRIEIGLFGKTVPKTVENFKELALKPQGEGYKGSKFHR 80

  Fly   526 VIKGFMVQTGDPT-GTGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPT 589
            :||.||:|.||.| |.||||:||:|..|:||.. .|||.....:||||||.:|||||||||...|
  Fly    81 IIKDFMIQGGDFTKGDGTGGRSIYGERFEDENF-KLKHYGAGWLSMANAGKDTNGSQFFITTKQT 144

  Fly   590 PWLDNKHTVFGRVYRGMEVVLNICNSKANPKTDKPYDDIKI 630
            .|||.:|.|||::..||.||..|.|| |....|:|..|:.|
  Fly   145 SWLDGRHVVFGKILSGMNVVRQIENS-ATDARDRPVKDVVI 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_001286847.1 WD40 <75..>312 CDD:225201
WD40 <79..300 CDD:295369
WD40 repeat 85..122 CDD:293791
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 76/155 (49%)
CG2852NP_611695.1 cyclophilin 30..188 CDD:294131 77/157 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447225
Domainoid 1 1.000 81 1.000 Domainoid score I449
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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