DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and nktr

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:XP_001338072.5 Gene:nktr / 323005 ZFINID:ZDB-GENE-030131-1725 Length:1396 Species:Danio rerio


Alignment Length:153 Identity:71/153 - (46%)
Similarity:88/153 - (57%) Gaps:14/153 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 GDIHMRLFFKEVPKTVENF---CVHAKNG--------YYNGHIFHRVIKGFMVQTGDPT-GTGTG 543
            |.|..:||....|||.:||   |...|..        .|.|..||||:|.||:|.||.| |.|.|
Zfish    21 GRIVFQLFSDICPKTSKNFLCLCTGEKGSGKATGKKLCYKGSTFHRVVKNFMIQGGDFTEGNGRG 85

  Fly   544 GKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEV 608
            |:||:|..|:||.. :|||||.:.:||||.|.:|||||||||....|.||..|.|||.|..|.||
Zfish    86 GESIFGGFFEDENF-TLKHDRAFLLSMANRGKDTNGSQFFITTKTAPHLDGVHVVFGLVISGFEV 149

  Fly   609 VLNICNSKANPKTDKPYDDIKII 631
            :.||...|.: ...:||.|:::|
Zfish   150 IKNIEGLKTD-SASRPYADVRVI 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 71/153 (46%)
nktrXP_001338072.5 None
Blue background indicates that the domain is not in the aligned region.

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