DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and Ppwd1

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001099876.1 Gene:Ppwd1 / 294711 RGDID:1310204 Length:646 Species:Rattus norvegicus


Alignment Length:641 Identity:375/641 - (58%)
Similarity:484/641 - (75%) Gaps:13/641 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SDKTKEDLKRSAPE-------EENEPQEESVSSEKEAEGEEDAWIGPMPSEQSAPAPAKKKKVLP 59
            ||...:..:|..||       .|.||.......|:..:..|:.|:||:|.|.:.   |||:|||.
  Rat     7 SDSQLKRRRRRDPEGSEKTELSEREPALAVEGREENDDENEERWVGPLPVEATL---AKKRKVLE 68

  Fly    60 YEHIYLENLPNAESYERSYMHRDVITHLVCTKTDFVVTASLDGHIKFWKKGELGIEFVKHFRSHL 124
            :|.:||||||:|..|||||||||||||:|||||||::|||.|||:|||||.|.||||||||||||
  Rat    69 FERVYLENLPSASMYERSYMHRDVITHVVCTKTDFIITASHDGHVKFWKKIEEGIEFVKHFRSHL 133

  Fly   125 VPIKSLTTNDSGTLLCSAATDQTAKVFDVVNFDMINIIRLGYTPQCSEWINGPGDAVQALAISDS 189
            ..|:|:..:..|.|.||...|:..||||||||||||:::|||.|...|||..||||:.::|.|:.
  Rat   134 GIIESIAVSSEGALFCSVGDDKAMKVFDVVNFDMINMLKLGYFPGQCEWIYCPGDAISSVAASEK 198

  Fly   190 ESSRIHIYDGQGGGEALHTLEKLHSAPVVAMCLNVAMETVISVDRNGILEYWQNSKYDYKFPQRL 254
            .:.:|.||||:|..:.||..:|||.:|:..:.||...:.|:|.|::|::|||....::|||| :.
  Rat   199 STGKIFIYDGRGDNQPLHIFDKLHVSPLTQIRLNPVYKAVVSSDKSGMIEYWTGPPHEYKFP-KT 262

  Fly   255 VNFDSKLDTSLFEFAKQKTQVTGLAATPDGKRFAAISTDRKVRVFQFNTGKLIRVFDEALSTYTQ 319
            ||::.|.||.|:||||.|...|.:..:||||:.|.|.:|||||:|:|.||||:|||||:||.:|:
  Rat   263 VNWEYKTDTDLYEFAKCKAYPTSICFSPDGKKIATIGSDRKVRIFRFLTGKLMRVFDESLSMFTE 327

  Fly   320 MQQTKHALPNMEFGRRMAAERDLEKTAQNATLNILFDSTGNFLLYPTMLGIKVINVVTNRCVTIL 384
            :||.:..||:||||||||.||:|||......:||:||.||:|:||.||||||||||.|||||.||
  Rat   328 LQQMRQQLPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRCVRIL 392

  Fly   385 GKTDNIRPLQVALFQGRIKRQKAAITMEQEASENPALQNILNDPTAFCTAYKKSRFYLYSRRLPS 449
            ||.:|||.:|:|||||..|:.:||.|:|.:|||||.||||..|||..||::||:|||::::|.|.
  Rat   393 GKQENIRVMQLALFQGIAKKHRAAATIEMKASENPVLQNIQADPTIVCTSFKKNRFYMFTKREPE 457

  Fly   450 DLQ--DVDRDIFNEKPSKEDIIAVPEASVVQRIYENVVLHTTKGDIHMRLFFKEVPKTVENFCVH 512
            |.:  |.|||:||||||||:::|..:|...:|:.::.::||:.||||::||..|.||||||||||
  Rat   458 DTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIVHTSMGDIHIKLFPVECPKTVENFCVH 522

  Fly   513 AKNGYYNGHIFHRVIKGFMVQTGDPTGTGTGGKSIWGSDFKDEFVPSLKHDRPYTVSMANAGPNT 577
            ::|||||||.|||:|||||:|||||||||.||:||||.:|:|||..:|:||||||:||||||.||
  Rat   523 SRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNT 587

  Fly   578 NGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLNICNSKANPKTDKPYDDIKIISI 633
            |||||||||:|||||||||||||||.:|||||..|.|.|.||||||||:|:.||:|
  Rat   588 NGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINI 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791 29/36 (81%)
WD40 <94..310 CDD:441893 112/215 (52%)
WD40 repeat 128..176 CDD:293791 25/47 (53%)
WD40 repeat 181..210 CDD:293791 10/28 (36%)
WD40 repeat 218..268 CDD:293791 19/49 (39%)
WD40 repeat 275..311 CDD:293791 20/35 (57%)
cyclophilin_WD40 485..633 CDD:238908 111/147 (76%)
Ppwd1NP_001099876.1 WD40 <89..319 CDD:441893 126/230 (55%)
WD40 repeat 136..177 CDD:293791 22/40 (55%)
WD40 repeat 191..219 CDD:293791 10/27 (37%)
WD40 repeat 226..277 CDD:293791 20/51 (39%)
WD40 repeat 283..326 CDD:293791 25/42 (60%)
cyclophilin_WD40 495..643 CDD:238908 111/147 (76%)

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