DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and Ppic

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001004215.1 Gene:Ppic / 291463 RGDID:1303221 Length:212 Species:Rattus norvegicus


Alignment Length:146 Identity:79/146 - (54%)
Similarity:92/146 - (63%) Gaps:6/146 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 GDIHMRLFFKEVPKTVENFCVHA--KNGY-YNGHIFHRVIKGFMVQTGDPTG-TGTGGKSIWGSD 551
            |.|.:.||.|.||:|||||...|  :.|| |.|.|||||||.||:|.||.|. .||||.||:|..
  Rat    52 GRIVIGLFGKVVPRTVENFVTLATGEKGYGYKGSIFHRVIKDFMIQGGDFTARDGTGGMSIYGET 116

  Fly   552 FKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLNICNSK 616
            |.||.. .|||.....||||||||:|||||||||:....|||.||.|||:|..||.||.:| ..:
  Rat   117 FPDENF-KLKHYGIGWVSMANAGPDTNGSQFFITLTKPAWLDGKHVVFGKVLDGMTVVHSI-ELQ 179

  Fly   617 ANPKTDKPYDDIKIIS 632
            |....|:|..|..|::
  Rat   180 ATDDHDRPLTDCTIVN 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 79/146 (54%)
PpicNP_001004215.1 cyclophilin_ABH_like 38..197 CDD:238907 79/146 (54%)
Blue background indicates that the domain is not in the aligned region.

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