DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3511 and cyn-6

DIOPT Version :10

Sequence 1:NP_611935.1 Gene:CG3511 / 37926 FlyBaseID:FBgn0035027 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_497257.1 Gene:cyn-6 / 175231 WormBaseID:WBGene00000882 Length:201 Species:Caenorhabditis elegans


Alignment Length:146 Identity:74/146 - (50%)
Similarity:95/146 - (65%) Gaps:10/146 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 GDIHMRLFFKEVPKTVENFCVHAKNGYYNGHI---FHRVIKGFMVQTGDPT-GTGTGGKSIWGSD 551
            |.|.:.||.:.|||||:||...|:.....|::   |||||:.||:|.||.| |.||||:||:|..
 Worm    40 GKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGER 104

  Fly   552 FKDEFVPSLKHDRPYTVSMANAGPNTNGSQFFITVLPTPWLDNKHTVFGRVYRGMEVVLNICNSK 616
            |:||.. .|:|..|..:||||||.:|||||||||...|.|||.||.|||::..||:||..|   :
 Worm   105 FEDENF-KLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREI---E 165

  Fly   617 ANPK--TDKPYDDIKI 630
            |.||  .|:|.:|:.|
 Worm   166 ATPKGAGDRPIEDVVI 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3511NP_611935.1 WD40 repeat 85..122 CDD:293791
WD40 <94..310 CDD:441893
WD40 repeat 128..176 CDD:293791
WD40 repeat 181..210 CDD:293791
WD40 repeat 218..268 CDD:293791
WD40 repeat 275..311 CDD:293791
cyclophilin_WD40 485..633 CDD:238908 74/146 (51%)
cyn-6NP_497257.1 cyclophilin 26..185 CDD:469651 74/146 (51%)
Blue background indicates that the domain is not in the aligned region.

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